Cyclin-dependent kinases (CDKs) are key genes regulating early development of Neptunea arthritica cumingii: evidence from comparative transcriptome and proteome analyses.

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY BMC Genomics Pub Date : 2024-12-19 DOI:10.1186/s12864-024-10970-3
Fengxiao Lv, Xinfan Ge, Yaqing Chang, Zhenlin Hao
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Abstract

In this study, we applied comparative transcriptomics and proteomics techniques to systematically investigate the dynamic expression patterns of genes and proteins at various stages of early embryonic development of the gastropod Neptunea arthritica cumingii. Twelve cyclin-dependent kinase (CDKs) genes and five downstream proteins associated with these CDKs were identified. Through techniques such as qRT-PCR, our data elucidate for the first time the regulatory functions of CDK family genes and establish CDKs as a pivotal gene cluster in the early embryonic development of N. cumingii. These findings not only enhance the understanding of molecular developmental biology in N. cumingii and marine gastropods in general but also provide significant insights into the mechanisms involved in early embryonic development in N. cumingii. Furthermore, our results provide theoretical guidance for advancing artificial breeding technology for N. cumingii.

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细胞周期蛋白依赖性激酶(CDKs)是调控 Neptunea arthritica cumingii 早期发育的关键基因:来自比较转录组和蛋白质组分析的证据。
在这项研究中,我们应用比较转录组学和蛋白质组学技术系统地研究了腹足动物海王星关节炎不同胚胎发育阶段基因和蛋白质的动态表达模式。鉴定了12个细胞周期蛋白依赖性激酶(CDKs)基因和5个与这些CDKs相关的下游蛋白。通过qRT-PCR等技术,我们的数据首次阐明了CDK家族基因的调控功能,并确立了CDK在三角帆鱼早期胚胎发育中的关键基因簇。这些发现不仅提高了对三角帆和海洋腹足类动物分子发育生物学的认识,而且为三角帆早期胚胎发育的机制提供了重要的见解。同时,本研究结果为进一步推进三角杉人工育种技术提供了理论指导。
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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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