Impact of rs2046045 SNP in PDE8B on TSH Levels: Insights into Genetic Susceptibility to Hypothyroidism.

IF 2.1 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical Genetics Pub Date : 2024-12-20 DOI:10.1007/s10528-024-11005-y
Salim Khan, Nikki Rani, Anita Yadav, Ranjan Gupta
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Abstract

Hypothyroidism is the most prevalent thyroid disorder and leads to adverse effects on the human body. Serum thyroid stimulating hormone (TSH) values have been related to polymorphisms in multiple genes that may be involved in the regulation of thyroid function. The single nucleotide polymorphism (SNP) rs2046045 is situated in the intron region of the phosphodiesterase 8B (PDE8B) gene, which encodes a high-affinity cyclic adenosine monophosphate (cAMP)-specific phosphodiesterase widely expressed in thyroid tissue. The principal goal of the present study was to investigate the association between the SNP rs2046045 of the PDE8B gene and hypothyroidism. The study was designed as a case-control study, and a total of 160 hypothyroid and 160 healthy controls were involved. Blood samples were drawn from each individual, and deoxyribonuleic acid (DNA) was separated with a suitable DNA isolation kit. For genotyping, the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) technique was employed. The IBM Statistical Package for Social Sciences (SPSS) 25.0 was utilized to analyze the statistical data. Age differences between the patients and controls were not observed in the present study. The genotype frequency of homozygous wild type (TT), homozygous mutate type (GG), and heterozygous (GT) was 45%, 2.5%, and 52.5%, respectively, in control subjects and 27.5%, 11.25%, and 61.25%, respectively, in cases, and showed a significant difference (p = 0.0002). The minor G allele frequency is elevated in hypothyroid patients as compared to healthy control subjects (41.87% vs. 28.75%), p = 0.0005. The presence of the mutant allele G of rs2046045 in the PDE8B gene correlates with elevated serum TSH levels in hypothyroid patients.

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PDE8B中rs2046045 SNP对TSH水平的影响:对甲状腺功能减退的遗传易感性的见解
甲状腺功能减退症是最常见的甲状腺疾病,对人体有不良影响。血清促甲状腺激素(TSH)值与多个可能参与甲状腺功能调节的基因多态性有关。单核苷酸多态性(SNP) rs2046045位于磷酸二酯酶8B (PDE8B)基因的内含子区域,该基因编码一种在甲状腺组织中广泛表达的高亲和力环磷酸腺苷(cAMP)特异性磷酸二酯酶。本研究的主要目的是研究PDE8B基因SNP rs2046045与甲状腺功能减退症之间的关系。本研究设计为病例对照研究,共纳入160例甲状腺功能减退患者和160例健康对照。从每个个体抽取血样,用合适的DNA分离试剂盒分离脱氧核糖核酸(DNA)。基因分型采用聚合酶链反应-限制性片段长度多态性(PCR-RFLP)技术。采用IBM Statistical Package for Social Sciences (SPSS) 25.0对统计数据进行分析。在本研究中没有观察到患者和对照组之间的年龄差异。纯合野生型(TT)、纯合突变型(GG)和杂合型(GT)的基因型频率在对照组中分别为45%、2.5%和52.5%,在病例中分别为27.5%、11.25%和61.25%,差异有统计学意义(p = 0.0002)。甲状腺功能减退患者的G等位基因频率高于健康对照组(41.87% vs. 28.75%), p = 0.0005。PDE8B基因中rs2046045突变等位基因G的存在与甲状腺功能减退患者血清TSH水平升高相关。
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来源期刊
Biochemical Genetics
Biochemical Genetics 生物-生化与分子生物学
CiteScore
3.90
自引率
0.00%
发文量
133
审稿时长
4.8 months
期刊介绍: Biochemical Genetics welcomes original manuscripts that address and test clear scientific hypotheses, are directed to a broad scientific audience, and clearly contribute to the advancement of the field through the use of sound sampling or experimental design, reliable analytical methodologies and robust statistical analyses. Although studies focusing on particular regions and target organisms are welcome, it is not the journal’s goal to publish essentially descriptive studies that provide results with narrow applicability, or are based on very small samples or pseudoreplication. Rather, Biochemical Genetics welcomes review articles that go beyond summarizing previous publications and create added value through the systematic analysis and critique of the current state of knowledge or by conducting meta-analyses. Methodological articles are also within the scope of Biological Genetics, particularly when new laboratory techniques or computational approaches are fully described and thoroughly compared with the existing benchmark methods. Biochemical Genetics welcomes articles on the following topics: Genomics; Proteomics; Population genetics; Phylogenetics; Metagenomics; Microbial genetics; Genetics and evolution of wild and cultivated plants; Animal genetics and evolution; Human genetics and evolution; Genetic disorders; Genetic markers of diseases; Gene technology and therapy; Experimental and analytical methods; Statistical and computational methods.
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