Integrated bioinformatics analysis identifies ALDH18A1 as a prognostic hub gene in glutamine metabolism in lung adenocarcinoma.

IF 2.9 4区 医学 Q3 ENDOCRINOLOGY & METABOLISM Discover. Oncology Pub Date : 2025-01-02 DOI:10.1007/s12672-024-01698-3
Hao Ren, Deng-Feng Ge, Zi-Chen Yang, Zhen-Ting Cheng, Shou-Xiang Zhao, Bin Zhang
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Abstract

Glutamine metabolism is pivotal in cancer biology, profoundly influencing tumor growth, proliferation, and resistance to therapies. Cancer cells often exhibit an elevated dependence on glutamine for essential functions such as energy production, biosynthesis of macromolecules, and maintenance of redox balance. Moreover, altered glutamine metabolism can contribute to the formation of an immune-suppressive tumor microenvironment characterized by reduced immune cell infiltration and activity. In this study on lung adenocarcinoma, we employed consensus clustering and applied 101 types of machine learning methods to systematically identify key genes associated with glutamine metabolism and develop a risk model. This comprehensive approach provided a clearer understanding of how glutamine metabolism associates with cancer progression and patient outcomes. Notably, we constructed a robust nomogram based on clinical information and patient risk scores, which achieved a stable area under the curve (AUC) greater than 0.8 for predicting patient survival across four datasets, demonstrating high predictive accuracy. This nomogram not only enhances our ability to stratify patient risk but also offers potential targets for therapeutic intervention aimed at disrupting glutamine metabolism and sensitizing tumors to existing treatments. Moreover, we identified ALDH18A1 as a prognostic hub gene of glutamine metabolism, characterized by high expression levels in glutamine cluster 3, which is associated with poor clinical outcomes and worse survival, and is included in the risk model. Such insights underscore the critical role of glutamine metabolism in cancer and highlight avenues for personalized medicine in oncology research.

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综合生物信息学分析确定ALDH18A1是肺腺癌中谷氨酰胺代谢的预后中心基因。
谷氨酰胺代谢在肿瘤生物学中起关键作用,深刻影响肿瘤的生长、增殖和对治疗的耐药性。癌细胞在能量产生、大分子生物合成和氧化还原平衡维持等基本功能上经常表现出对谷氨酰胺的高度依赖。此外,谷氨酰胺代谢的改变可以促进免疫抑制肿瘤微环境的形成,其特征是免疫细胞浸润和活性降低。在肺腺癌的研究中,我们采用共识聚类,应用101种机器学习方法,系统地识别谷氨酰胺代谢相关的关键基因,建立风险模型。这种全面的方法提供了谷氨酰胺代谢如何与癌症进展和患者预后相关的更清晰的理解。值得注意的是,我们基于临床信息和患者风险评分构建了一个稳健的nomogram,该nomogram在4个数据集中实现了大于0.8的稳定曲线下面积(AUC),显示出较高的预测准确性。这张nomogram图不仅增强了我们对患者风险进行分层的能力,而且还提供了针对破坏谷氨酰胺代谢和使肿瘤对现有治疗变得敏感的治疗干预的潜在靶点。此外,我们发现ALDH18A1是谷氨酰胺代谢的预后中心基因,其特点是在谷氨酰胺聚类3中高表达,与较差的临床结果和较差的生存率相关,并被纳入风险模型。这些见解强调了谷氨酰胺代谢在癌症中的关键作用,并强调了肿瘤研究中个性化医疗的途径。
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来源期刊
Discover. Oncology
Discover. Oncology Medicine-Endocrinology, Diabetes and Metabolism
CiteScore
2.40
自引率
9.10%
发文量
122
审稿时长
5 weeks
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