Bioinformation study of immune microenvironment characteristics of disulfidptosis-related subtypes in ovarian cancer and prognostic model construction.

IF 2.8 4区 医学 Q3 ENDOCRINOLOGY & METABOLISM Discover. Oncology Pub Date : 2025-01-08 DOI:10.1007/s12672-025-01752-8
Ying Zhou, Yuhong Zhang, Yang Zhou, Yanzheng Gu, Youguo Chen, Juan Wang
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Abstract

Objective: Ovarian cancer significantly impacts women's reproductive health and remains challenging to diagnose and treat. Despite advancements in understanding DNA repair mechanisms and identifying novel therapeutic targets, additional strategies are still needed. Recently, a novel form of cell death called disulfidptosis, which is triggered by glucose deprivation, has been linked to treatment resistance and changes in the tumor microenvironment (TME). However, its role in ovarian cancer is not well understood.

Methods: Bioinformatics analysis was performed on RNA-seq data from TCGA and GEO databases to identify disulfidptosis-related genes in ovarian cancer. Differential expression analysis and pathway enrichment were conducted, followed by the development of a prognostic model using LASSO Cox regression, validated with GEO datasets (GSE13876, GSE26712). Clinical samples were analyzed using quantitative polymerase chain reaction (qPCR) and immunohistochemistry (IHC) to validate gene expression.

Results: This study identified disulfidptosis-related gene subtypes in ovarian cancer and demonstrated their influence on the tumor microenvironment (TME), immunotherapy responses, and patient prognosis. Six genes (IFNB1, IGF2, CD40LG, IL1B, IL21, CD38) associated with disulfidptosis were identified and incorporated into a prognostic model. This model predicted patient outcomes and was validated externally. Clinical validation showed its accuracy in predicting progression-free survival and resistance to platinum-based chemotherapy.

Conclusion: Our findings highlight the significant impact of disulfidptosis-related genes on the ovarian cancer tumor microenvironment, providing insights that could support the development of clinical evaluations and personalized treatment strategies.

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卵巢癌二硫中毒相关亚型免疫微环境特征的生物信息研究及预后模型构建。
目的:卵巢癌严重影响妇女生殖健康,诊断和治疗仍然具有挑战性。尽管在理解DNA修复机制和确定新的治疗靶点方面取得了进展,但仍然需要额外的策略。最近,一种由葡萄糖剥夺引发的新形式的细胞死亡被称为二硫下垂,与治疗抵抗和肿瘤微环境(TME)的变化有关。然而,它在卵巢癌中的作用尚不清楚。方法:对TCGA和GEO数据库的RNA-seq数据进行生物信息学分析,鉴定卵巢癌二硫中毒相关基因。进行差异表达分析和途径富集,随后使用LASSO Cox回归建立预后模型,并使用GEO数据集(GSE13876, GSE26712)进行验证。采用定量聚合酶链反应(qPCR)和免疫组化(IHC)对临床样品进行分析,验证基因表达。结果:本研究确定了卵巢癌中二硫中毒相关基因亚型,并证明了它们对肿瘤微环境(TME)、免疫治疗反应和患者预后的影响。6个基因(IFNB1、IGF2、CD40LG、IL1B、IL21、CD38)被鉴定出与双睑垂症相关,并被纳入预后模型。该模型预测了患者的预后,并在外部进行了验证。临床验证显示其在预测无进展生存期和对铂类化疗的耐药方面的准确性。结论:我们的研究结果强调了二硫中毒相关基因对卵巢癌肿瘤微环境的重要影响,为临床评估和个性化治疗策略的发展提供了新的见解。
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来源期刊
Discover. Oncology
Discover. Oncology Medicine-Endocrinology, Diabetes and Metabolism
CiteScore
2.40
自引率
9.10%
发文量
122
审稿时长
5 weeks
期刊最新文献
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