Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil.

IF 4.2 2区 生物学 Q2 MICROBIOLOGY Microorganisms Pub Date : 2024-12-16 DOI:10.3390/microorganisms12122599
Mikhail Rayko, Irina Kravchenko, Alla Lapidus
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Abstract

A whole genome sequence of a new strain of the nitrogen-fixing bacterium Azospirillum doebereinerae, known for its diverse plant growth-promoting bacteria (PGPB), was obtained for the first time. The strain, designated Azospirillum doebereinerae AT, was isolated during a soil analysis in the Chernevaya taiga of Western Siberia, a unique and fertile forest ecosystem known for its diverse plant growth-promoting bacteria (PGPB). The A. doebereinerae genome under study is fully assembled into seven circular molecules, none of which are unequivocally plasmids, with a total length of 6.94 Mb and a G + C content of 68.66%. A detailed phylogenomic analysis confirmed its placement within the genus Azospirillum, specifically closely related to A. doebereinerae GSF71T. Functional annotation revealed genes involved in nitrogen metabolism, highlighting the potential of strain TA as a biofertilizer and plant growth-promoting agent. The findings contribute to our understanding of the genomic diversity and metabolic potential of the Azospirillum genus, and they are of interest for further study in the field of comparative bacterial genomics, given the strain's multi-chromosomal genome structure.

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西伯利亚西部切尔内维亚针叶林土壤中一株新固氮螺旋菌TA的全基因组序列。
首次获得了一株固氮细菌(Azospirillum doebereinerae)的全基因组序列。Azospirillum doebereinerae以其多样性的植物生长促进菌而闻名。该菌株被命名为Azospirillum doebereinerae AT,是在西伯利亚西部Chernevaya针叶林的土壤分析中分离出来的,Chernevaya针叶林是一个独特而肥沃的森林生态系统,以其多种植物生长促进细菌(PGPB)而闻名。所研究的a . doebereinerae基因组完全组装成7个圆形分子,其中没有一个是明确的质粒,总长度为6.94 Mb, G + C含量为68.66%。详细的系统发育分析证实它属于偶氮螺旋藻属,与A. doebereinerae GSF71T密切相关。功能注释揭示了与氮代谢有关的基因,突出了菌株TA作为生物肥料和植物生长促进剂的潜力。这些发现有助于我们了解氮螺旋菌属的基因组多样性和代谢潜力,并且考虑到该菌株的多染色体基因组结构,它们对比较细菌基因组学领域的进一步研究具有重要意义。
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来源期刊
Microorganisms
Microorganisms Medicine-Microbiology (medical)
CiteScore
7.40
自引率
6.70%
发文量
2168
审稿时长
20.03 days
期刊介绍: Microorganisms (ISSN 2076-2607) is an international, peer-reviewed open access journal which provides an advanced forum for studies related to prokaryotic and eukaryotic microorganisms, viruses and prions. It publishes reviews, research papers and communications. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. Electronic files and software regarding the full details of the calculation or experimental procedure, if unable to be published in a normal way, can be deposited as supplementary electronic material.
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