Low-dimensional controllability of brain networks.

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS PLoS Computational Biology Pub Date : 2025-01-07 eCollection Date: 2025-01-01 DOI:10.1371/journal.pcbi.1012691
Remy Ben Messaoud, Vincent Le Du, Camile Bousfiha, Marie-Constance Corsi, Juliana Gonzalez-Astudillo, Brigitte Charlotte Kaufmann, Tristan Venot, Baptiste Couvy-Duchesne, Lara Migliaccio, Charlotte Rosso, Paolo Bartolomeo, Mario Chavez, Fabrizio De Vico Fallani
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Abstract

Identifying the driver nodes of a network has crucial implications in biological systems from unveiling causal interactions to informing effective intervention strategies. Despite recent advances in network control theory, results remain inaccurate as the number of drivers becomes too small compared to the network size, thus limiting the concrete usability in many real-life applications. To overcome this issue, we introduced a framework that integrates principles from spectral graph theory and output controllability to project the network state into a smaller topological space formed by the Laplacian network structure. Through extensive simulations on synthetic and real networks, we showed that a relatively low number of projected components can significantly improve the control accuracy. By introducing a new low-dimensional controllability metric we experimentally validated our method on N = 6134 human connectomes obtained from the UK-biobank cohort. Results revealed previously unappreciated influential brain regions, enabled to draw directed maps between differently specialized cerebral systems, and yielded new insights into hemispheric lateralization. Taken together, our results offered a theoretically grounded solution to deal with network controllability and provided insights into the causal interactions of the human brain.

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大脑网络的低维可控性。
识别网络的驱动节点在生物系统中具有至关重要的意义,从揭示因果相互作用到告知有效的干预策略。尽管网络控制理论最近取得了进展,但由于驱动器的数量与网络规模相比太小,因此结果仍然不准确,从而限制了许多实际应用中的具体可用性。为了克服这个问题,我们引入了一个框架,该框架集成了谱图理论和输出可控性的原理,将网络状态投影到由拉普拉斯网络结构形成的较小拓扑空间中。通过对合成网络和真实网络的大量仿真,我们发现相对较少的投影分量可以显著提高控制精度。通过引入一个新的低维可控性度量,我们在英国生物银行队列中获得的N = 6134个人类连接体上实验验证了我们的方法。结果揭示了以前未被认识到的有影响力的大脑区域,能够在不同的专门大脑系统之间绘制定向地图,并对半球偏侧化产生了新的见解。综上所述,我们的研究结果为处理网络可控性提供了一个理论基础的解决方案,并为人类大脑的因果相互作用提供了见解。
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来源期刊
PLoS Computational Biology
PLoS Computational Biology BIOCHEMICAL RESEARCH METHODS-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
7.10
自引率
4.70%
发文量
820
审稿时长
2.5 months
期刊介绍: PLOS Computational Biology features works of exceptional significance that further our understanding of living systems at all scales—from molecules and cells, to patient populations and ecosystems—through the application of computational methods. Readers include life and computational scientists, who can take the important findings presented here to the next level of discovery. Research articles must be declared as belonging to a relevant section. More information about the sections can be found in the submission guidelines. Research articles should model aspects of biological systems, demonstrate both methodological and scientific novelty, and provide profound new biological insights. Generally, reliability and significance of biological discovery through computation should be validated and enriched by experimental studies. Inclusion of experimental validation is not required for publication, but should be referenced where possible. Inclusion of experimental validation of a modest biological discovery through computation does not render a manuscript suitable for PLOS Computational Biology. Research articles specifically designated as Methods papers should describe outstanding methods of exceptional importance that have been shown, or have the promise to provide new biological insights. The method must already be widely adopted, or have the promise of wide adoption by a broad community of users. Enhancements to existing published methods will only be considered if those enhancements bring exceptional new capabilities.
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