Prediction of Thermodynamic Properties of C60-Based Fullerenols Using Machine Learning.

IF 5.5 1区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Chemical Theory and Computation Pub Date : 2025-01-28 Epub Date: 2025-01-10 DOI:10.1021/acs.jctc.4c01438
Guiping Yang, Shu Zhang, Pei Zhao, Chuanhao Li, Lei Tang, Jun Jiang, Chong Zhao
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Abstract

Traditional machine learning methods face significant challenges in predicting the properties of highly symmetric molecules. In this study, we developed a machine learning model based on graph neural networks (GNNs) to accurately and swiftly predict the thermodynamic and photochemical properties of fullerenols, such as C60(OH)n (n = 1 to 30). First, we established a global method for generating fullerenol isomers through isomer fingerprinting, which can generate all possible isomers or produce diverse structural types on demand. Significantly, by incorporating interpretable descriptors such as atomic labels, bond lengths, and bond angles from highly symmetric isomers, our multilayer GNN model achieved over 90% accuracy in predicting the thermodynamic stability of fullerenols. The model also performed excellently in predicting electronic properties, including the highest occupied molecular orbital (HOMO), lowest unoccupied molecular orbital (LUMO), and the energy gap. Overall, this work demonstrates a new strategy using interpretable descriptors for accurately predicting the properties of highly symmetric structures, offering theoretical chemists a valuable tool for studying these materials.

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基于c60的富勒烯醇热力学性质的机器学习预测。
传统的机器学习方法在预测高度对称分子的性质方面面临重大挑战。在这项研究中,我们开发了一个基于图神经网络(GNNs)的机器学习模型,以准确、快速地预测富勒烯醇(如C60(OH)n (n = 1至30)的热力学和光化学性质。首先,我们建立了一种通过异构体指纹图谱生成富勒烯醇异构体的全局方法,该方法可以根据需要生成所有可能的异构体或多种结构类型。值得注意的是,通过结合原子标记、键长和高度对称异构体的键角等可解释描述符,我们的多层GNN模型在预测富勒烯醇的热力学稳定性方面达到了90%以上的准确率。该模型还能很好地预测电子性质,包括最高已占据分子轨道(HOMO)、最低未占据分子轨道(LUMO)和能隙。总的来说,这项工作展示了一种使用可解释描述符来准确预测高度对称结构性质的新策略,为理论化学家研究这些材料提供了有价值的工具。
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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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