Further insights into the molecular mechanisms underlying tobacco straw cultivation of Pleurotus ostreatus by comparative transcriptome analyses.

IF 3.4 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Genomics Pub Date : 2025-01-10 DOI:10.1016/j.ygeno.2025.110992
Xinran Li, Liu Luo, Xuying Wang, Miao Zhu
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Abstract

Cultivation of edible mushrooms on straw can significantly reduce production costs, provide notable environmental and ecological benefits. However, the molecular mechanisms via which mushrooms utilize straw are not well understood. We conducted a comparative transcriptomic analysis of oyster mushrooms cultivated on two different biomass substrates, namely, corncob and tobacco straw at various developmental stages. The results revealed that the biomass substrates induced distinct transcriptomic changes during mycelium and fruiting body development. Straw affected the metabolism of pyruvate and acetyl-CoA, with significant downregulation of pyruvate decarboxylase expression, and upregulation of acetyl-CoA hydrolase during mycelial growth. Genes associated with cell wall and carbohydrate metabolism were significantly upregulated, and the PLD-PA-mTOR pathway was activated during the fruiting body development stage in mushrooms grown on straw. These findings reveal the transcriptomic adaptations of oyster mushrooms to tobacco straw, and enhance our understanding of the molecular mechanisms underlying biomass conversion by edible fungi using straw.

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通过比较转录组分析进一步了解平菇烟草秸秆栽培的分子机制。
秸秆栽培食用菌可显著降低生产成本,提供显著的环境和生态效益。然而,蘑菇利用秸秆的分子机制尚不清楚。本研究对不同发育阶段在玉米芯和烟草秸秆两种生物质基质上培养的平菇进行了转录组学比较分析。结果表明,生物量基质在菌丝和子实体发育过程中诱导了明显的转录组变化。秸秆影响了丙酮酸和乙酰辅酶a的代谢,在菌丝生长过程中丙酮酸脱羧酶表达显著下调,乙酰辅酶a水解酶表达显著上调。在秸秆上生长的蘑菇子实体发育阶段,细胞壁和碳水化合物代谢相关基因显著上调,PLD-PA-mTOR通路被激活。这些发现揭示了平菇对烟草秸秆的转录组适应性,并加深了我们对食用菌利用秸秆转化生物量的分子机制的理解。
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来源期刊
Genomics
Genomics 生物-生物工程与应用微生物
CiteScore
9.60
自引率
2.30%
发文量
260
审稿时长
60 days
期刊介绍: Genomics is a forum for describing the development of genome-scale technologies and their application to all areas of biological investigation. As a journal that has evolved with the field that carries its name, Genomics focuses on the development and application of cutting-edge methods, addressing fundamental questions with potential interest to a wide audience. Our aim is to publish the highest quality research and to provide authors with rapid, fair and accurate review and publication of manuscripts falling within our scope.
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