Identification of aberrant plasma vesicles containing AAK1 and CCDC18-AS1 in adolescents with major depressive disorder and preliminary exploration of treatment efficacy

IF 3.4 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Genomics Pub Date : 2025-01-09 DOI:10.1016/j.ygeno.2025.110993
Yifan Xu , Rong Zhang , Xinzhe Du , Yangxi Huang , Yao Gao , Yujiao Wen , Dan Qiao , Ning Sun , Zhifen Liu
{"title":"Identification of aberrant plasma vesicles containing AAK1 and CCDC18-AS1 in adolescents with major depressive disorder and preliminary exploration of treatment efficacy","authors":"Yifan Xu ,&nbsp;Rong Zhang ,&nbsp;Xinzhe Du ,&nbsp;Yangxi Huang ,&nbsp;Yao Gao ,&nbsp;Yujiao Wen ,&nbsp;Dan Qiao ,&nbsp;Ning Sun ,&nbsp;Zhifen Liu","doi":"10.1016/j.ygeno.2025.110993","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><div>Major depressive disorder (MDD) during adolescence significantly jeopardizes both mental and physical health. However, the etiology underlying MDD in adolescents remains unclear.</div></div><div><h3>Methods</h3><div>A total of 74 adolescents with MDD and 40 health controls (HCs) who underwent comprehensive clinical and cognitive assessments were enrolled. Differential expression analysis was conducted on plasma extracellular vesicles (EVs) carrying long non-coding RNAs (lncRNAs) and messenger RNAs (mRNAs) by microarray analysis. Two possible lncRNA-miR-mRNA networks were established and candidate regulatory axes were generated using the StarBase, miRDB, and TargetScan bioinformatics databases. Quantitative real-time polymerase chain reaction (qRT-PCR) was used to validate the candidate molecules and signaling axes in a clinical cohort.</div></div><div><h3>Results</h3><div>A total of 3752 dysregulated lncRNAs and 1789 dysfunctional mRNAs were identified. Two candidate regulatory axes (AC156455.1/miR-126-5p/AAK1 and CCDC18-AS1/miR-6835-5p/CCND2) with potential connections with MDD were selected. The candidate molecules exhibit differential expression patterns among adolescents with MDD and HCs, as well as before and after treatment with sertraline in adolescents with MDD. Furthermore, AAK1, CCDC18-AS1, and miR-6835-5p expressions exhibited significant differences between the response and non-response groups. Baseline expression of CCDC18-AS1, miR-6835-5p, and CCND2 could predict the therapeutic effect of sertraline, which may be associated with reducing suicidal ideation and improving cognitive function.</div></div><div><h3>Conclusion</h3><div>Our study may provide insights into the understanding of the underlying pathological mechanisms in adolescents with MDD.</div></div>","PeriodicalId":12521,"journal":{"name":"Genomics","volume":"117 2","pages":"Article 110993"},"PeriodicalIF":3.4000,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genomics","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0888754325000096","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Background

Major depressive disorder (MDD) during adolescence significantly jeopardizes both mental and physical health. However, the etiology underlying MDD in adolescents remains unclear.

Methods

A total of 74 adolescents with MDD and 40 health controls (HCs) who underwent comprehensive clinical and cognitive assessments were enrolled. Differential expression analysis was conducted on plasma extracellular vesicles (EVs) carrying long non-coding RNAs (lncRNAs) and messenger RNAs (mRNAs) by microarray analysis. Two possible lncRNA-miR-mRNA networks were established and candidate regulatory axes were generated using the StarBase, miRDB, and TargetScan bioinformatics databases. Quantitative real-time polymerase chain reaction (qRT-PCR) was used to validate the candidate molecules and signaling axes in a clinical cohort.

Results

A total of 3752 dysregulated lncRNAs and 1789 dysfunctional mRNAs were identified. Two candidate regulatory axes (AC156455.1/miR-126-5p/AAK1 and CCDC18-AS1/miR-6835-5p/CCND2) with potential connections with MDD were selected. The candidate molecules exhibit differential expression patterns among adolescents with MDD and HCs, as well as before and after treatment with sertraline in adolescents with MDD. Furthermore, AAK1, CCDC18-AS1, and miR-6835-5p expressions exhibited significant differences between the response and non-response groups. Baseline expression of CCDC18-AS1, miR-6835-5p, and CCND2 could predict the therapeutic effect of sertraline, which may be associated with reducing suicidal ideation and improving cognitive function.

Conclusion

Our study may provide insights into the understanding of the underlying pathological mechanisms in adolescents with MDD.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
青少年重度抑郁障碍中含有AAK1和CCDC18-AS1的异常血浆囊泡的鉴定及治疗效果的初步探讨
背景:青春期重度抑郁障碍(MDD)严重危害身心健康。然而,青少年重度抑郁障碍的病因仍不清楚:方法:共招募了 74 名患有 MDD 的青少年和 40 名健康对照者(HCs),他们都接受了全面的临床和认知评估。通过微阵列分析对携带长非编码RNA(lncRNA)和信使RNA(mRNA)的血浆细胞外囊泡(EVs)进行了差异表达分析。利用StarBase、miRDB和TargetScan生物信息学数据库建立了两个可能的lncRNA-miR-mRNA网络,并生成了候选调控轴。利用定量实时聚合酶链反应(qRT-PCR)在临床队列中验证了候选分子和信号轴:结果:共鉴定出3752个调控失调的lncRNA和1789个功能失调的mRNA。结果:共鉴定出3752个表达失调的lncRNA和1789个功能失调的mRNA,并筛选出两个与MDD有潜在联系的候选调控轴(AC156455.1/miR-126-5p/AAK1和CCDC18-AS1/miR-6835-5p/CCND2)。候选分子在患有 MDD 的青少年和 HCs 之间以及患有 MDD 的青少年接受舍曲林治疗前后表现出不同的表达模式。此外,AAK1、CCDC18-AS1 和 miR-6835-5p 的表达在有反应组和无反应组之间存在显著差异。CCDC18-AS1、miR-6835-5p和CCND2的基线表达可预测舍曲林的治疗效果,这可能与减少自杀意念和改善认知功能有关:我们的研究可能有助于了解青少年 MDD 的潜在病理机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Genomics
Genomics 生物-生物工程与应用微生物
CiteScore
9.60
自引率
2.30%
发文量
260
审稿时长
60 days
期刊介绍: Genomics is a forum for describing the development of genome-scale technologies and their application to all areas of biological investigation. As a journal that has evolved with the field that carries its name, Genomics focuses on the development and application of cutting-edge methods, addressing fundamental questions with potential interest to a wide audience. Our aim is to publish the highest quality research and to provide authors with rapid, fair and accurate review and publication of manuscripts falling within our scope.
期刊最新文献
Comprehensive expression genome-wide association study of long non-coding RNAs in four porcine tissues. 16S rDNA sequencing reveal synergistic effects of silkworm feces and earthworms on nutrient-poor soil microbial community structure and function in Guangxi. Global effect of copper excess and deficiency in Saccharomyces cerevisiae proficient or deficient in nonsense-mediated mRNA decay Genetic variation underlying nitrogen-deficiency tolerance in Gossypium hirsutum during the seedling stage GnRHR inhibits the malignant progression of triple-negative breast cancer by upregulating FOS and IFI44L
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1