A new Drosophila melanogaster research resource: CRISPR-induced mutations for clonal analysis of fourth chromosome genes.

IF 2.1 3区 生物学 Q3 GENETICS & HEREDITY G3: Genes|Genomes|Genetics Pub Date : 2025-01-13 DOI:10.1093/g3journal/jkaf006
Bonnie M Weasner, Brandon P Weasner, Kevin R Cook, Michael J Stinchfield, Shu Kondo, Kuniaki Saito, Justin P Kumar, Stuart J Newfeld
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Abstract

As part of an ongoing effort to generate comprehensive resources for the experimental analysis of fourth chromosome genes in Drosophila melanogaster, the Fourth Chromosome Resource Project has used CRISPR mutagenesis with single guide RNAs to isolate mutations in 62 of the 80 fourth chromosome, protein-coding genes. These mutations were induced on a fourth chromosome bearing a basal FRT insertion to facilitate experimental approaches involving FLP recombinase-induced mitotic recombination. To permit straightforward comparisons among mutant stocks, most of the mutations were generated on isogenic fourth chromosomes, which were then crossed into a common genetic background. Of the 119 mutations, 84 are frameshift mutations likely to be null alleles, 29 are small, in-frame deletions and 6 have yet to be characterized molecularly. The mutations were tested for recessive lethal, female sterile and visible phenotypes. Stable stocks for most of the mutations have been submitted to repositories in the United States and Japan for public distribution.

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一种新的黑腹果蝇研究资源:crispr诱导的第四染色体基因克隆分析突变。
作为一项正在进行的努力的一部分,为黑颊果蝇第四染色体基因的实验分析产生综合资源,第四染色体资源项目使用CRISPR诱变与单向导rna分离了80个第四染色体中62个蛋白质编码基因的突变。这些突变是在带有基础FRT插入的第4条染色体上诱导的,以促进涉及FLP重组酶诱导的有丝分裂重组的实验方法。为了在突变种群之间进行直接比较,大多数突变发生在同基因第四染色体上,然后将其交叉到共同的遗传背景中。在119个突变中,84个是移码突变,可能是无效等位基因,29个是小的,帧内缺失,6个尚未被分子表征。对突变进行了隐性致死、雌性不育和可见表型检测。大多数突变的稳定库存已提交给美国和日本的储存库,供公众分发。
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来源期刊
G3: Genes|Genomes|Genetics
G3: Genes|Genomes|Genetics GENETICS & HEREDITY-
CiteScore
5.10
自引率
3.80%
发文量
305
审稿时长
3-8 weeks
期刊介绍: G3: Genes, Genomes, Genetics provides a forum for the publication of high‐quality foundational research, particularly research that generates useful genetic and genomic information such as genome maps, single gene studies, genome‐wide association and QTL studies, as well as genome reports, mutant screens, and advances in methods and technology. The Editorial Board of G3 believes that rapid dissemination of these data is the necessary foundation for analysis that leads to mechanistic insights. G3, published by the Genetics Society of America, meets the critical and growing need of the genetics community for rapid review and publication of important results in all areas of genetics. G3 offers the opportunity to publish the puzzling finding or to present unpublished results that may not have been submitted for review and publication due to a perceived lack of a potential high-impact finding. G3 has earned the DOAJ Seal, which is a mark of certification for open access journals, awarded by DOAJ to journals that achieve a high level of openness, adhere to Best Practice and high publishing standards.
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