Cytopathology Image Super-Resolution of Portable Microscope Based on Convolutional Window-Integration Transformer

IF 4.2 2区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC IEEE Transactions on Computational Imaging Pub Date : 2025-01-01 DOI:10.1109/TCI.2024.3522761
Jinyu Zhang;Shenghua Cheng;Xiuli Liu;Ning Li;Gong Rao;Shaoqun Zeng
{"title":"Cytopathology Image Super-Resolution of Portable Microscope Based on Convolutional Window-Integration Transformer","authors":"Jinyu Zhang;Shenghua Cheng;Xiuli Liu;Ning Li;Gong Rao;Shaoqun Zeng","doi":"10.1109/TCI.2024.3522761","DOIUrl":null,"url":null,"abstract":"High-quality cytopathology images are the guarantee of cervical cancer computer-aided screening. However, obtaining such images is dependent on expensive devices, which hinders the screening popularization in less developed areas. In this study, we propose a convolutional window-integration Transformer for cytopathology image super-resolution (SR) of portable microscope. We use self-attention within the window to integrate patches, and then design a convolutional window-integration feed-forward network with two 5 × 5 size kernels to achieve cross-window patch integration. This design avoids long-range self-attention and facilitates SR local mapping learning. Besides, we design a multi-layer feature fusion in feature extraction to enhance high-frequency details, achieving better SR reconstruction. Finally, we register and establish a dataset of 239,100 paired portable microscope images and standard microscope images based on feature point matching. A series of experiments demonstrate that our model has the minimum parameter number and outperforms state-of-the-art CNN-based and recent Transformer-based SR models with PSNR improvement of 0.09–0.53 dB. We release this dataset and codes publicly to promote the development of computational cytopathology imaging.","PeriodicalId":56022,"journal":{"name":"IEEE Transactions on Computational Imaging","volume":"11 ","pages":"77-88"},"PeriodicalIF":4.2000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Computational Imaging","FirstCategoryId":"94","ListUrlMain":"https://ieeexplore.ieee.org/document/10819978/","RegionNum":2,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
引用次数: 0

Abstract

High-quality cytopathology images are the guarantee of cervical cancer computer-aided screening. However, obtaining such images is dependent on expensive devices, which hinders the screening popularization in less developed areas. In this study, we propose a convolutional window-integration Transformer for cytopathology image super-resolution (SR) of portable microscope. We use self-attention within the window to integrate patches, and then design a convolutional window-integration feed-forward network with two 5 × 5 size kernels to achieve cross-window patch integration. This design avoids long-range self-attention and facilitates SR local mapping learning. Besides, we design a multi-layer feature fusion in feature extraction to enhance high-frequency details, achieving better SR reconstruction. Finally, we register and establish a dataset of 239,100 paired portable microscope images and standard microscope images based on feature point matching. A series of experiments demonstrate that our model has the minimum parameter number and outperforms state-of-the-art CNN-based and recent Transformer-based SR models with PSNR improvement of 0.09–0.53 dB. We release this dataset and codes publicly to promote the development of computational cytopathology imaging.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
基于卷积窗积分转换器的便携式显微镜细胞病理图像超分辨率研究
高质量的细胞病理学图像是宫颈癌计算机辅助筛查的保证。然而,这种图像的获取依赖于昂贵的设备,这阻碍了筛查在欠发达地区的普及。在这项研究中,我们提出了一种用于便携式显微镜细胞病理图像超分辨率(SR)的卷积窗积分转换器。我们利用窗口内的自关注对小块进行积分,然后设计一个具有两个5 × 5大小核的卷积窗口积分前馈网络来实现跨窗口的小块积分。这种设计避免了长时间的自我关注,促进了SR局部映射学习。此外,我们在特征提取中设计了多层特征融合,增强高频细节,实现了更好的SR重建。最后,基于特征点匹配,我们注册并建立了239,100张配对的便携式显微镜图像和标准显微镜图像的数据集。一系列实验表明,我们的模型具有最小的参数数,并且优于最先进的基于cnn和最近基于transformer的SR模型,PSNR提高了0.09-0.53 dB。我们公开发布该数据集和编码,以促进计算细胞病理学成像的发展。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
IEEE Transactions on Computational Imaging
IEEE Transactions on Computational Imaging Mathematics-Computational Mathematics
CiteScore
8.20
自引率
7.40%
发文量
59
期刊介绍: The IEEE Transactions on Computational Imaging will publish articles where computation plays an integral role in the image formation process. Papers will cover all areas of computational imaging ranging from fundamental theoretical methods to the latest innovative computational imaging system designs. Topics of interest will include advanced algorithms and mathematical techniques, model-based data inversion, methods for image and signal recovery from sparse and incomplete data, techniques for non-traditional sensing of image data, methods for dynamic information acquisition and extraction from imaging sensors, software and hardware for efficient computation in imaging systems, and highly novel imaging system design.
期刊最新文献
Full Matrix Wavefield Migration for Layered Photoacoustic Imaging GroupCDL: Interpretable Denoising and Compressed Sensing MRI via Learned Group-Sparsity and Circulant Attention Looking Around Flatland: End-to-End 2D Real-Time NLOS Imaging Computational Comparison and Validation of Point Spread Functions for Optical Microscopes Estimation-Denoising Integration Network Architecture With Updated Parameter for MRI Reconstruction
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1