Engineering of acyl ligase domain in non-ribosomal peptide synthetases to change fatty acid moieties of lipopeptides.

IF 5.9 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Communications Chemistry Pub Date : 2025-01-21 DOI:10.1038/s42004-024-01379-w
Rina Aoki, Eri Kumagawa, Kazuaki Kamata, Hideo Ago, Naoki Sakai, Tomohisa Hasunuma, Naoaki Taoka, Yukari Ohta, Shingo Kobayashi
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Abstract

Cyclic lipopeptides (CLPs) produced by the genus Bacillus are amphiphiles composed of hydrophilic amino acid and hydrophobic fatty acid moieties and are biosynthesised by non-ribosomal peptide synthetases (NRPSs). CLPs are produced as a mixture of homologues with different fatty acid moieties, whose length affects CLP activity. Iturin family lipopeptides are a family of CLPs comprising cyclic heptapeptides and β-amino fatty acids and have antimicrobial activity. There is little research on how the length of the fatty acid moiety of iturin family lipopeptides is determined. Here, we demonstrated that the acyl ligase (AL) domain determines the length of the fatty acid moiety in vivo. In addition, enzyme assays revealed how mutations in the substrate-binding pocket of the AL domain affected substrate specificity in vitro. Our findings have implications for the design of fatty acyl moieties for CLP synthesis using NRPS.

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非核糖体肽合成酶中酰基连接酶结构域的工程改造以改变脂肽的脂肪酸部分。
由芽孢杆菌属产生的环状脂肽(CLPs)是由亲水氨基酸和疏水脂肪酸部分组成的两亲生物,由非核糖体肽合成酶(NRPSs)生物合成。CLP是由具有不同脂肪酸片段的同源物混合产生的,其长度影响CLP的活性。Iturin家族脂肽是由环七肽和β-氨基酸组成的clp家族,具有抗菌活性。关于如何确定iturin家族脂肽的脂肪酸部分长度的研究很少。在这里,我们证明了酰基连接酶(AL)结构域决定了体内脂肪酸片段的长度。此外,酶分析揭示了AL结构域底物结合口袋的突变如何在体外影响底物特异性。我们的发现对使用NRPS合成CLP的脂肪酰基部分的设计具有启示意义。
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来源期刊
Communications Chemistry
Communications Chemistry Chemistry-General Chemistry
CiteScore
7.70
自引率
1.70%
发文量
146
审稿时长
13 weeks
期刊介绍: Communications Chemistry is an open access journal from Nature Research publishing high-quality research, reviews and commentary in all areas of the chemical sciences. Research papers published by the journal represent significant advances bringing new chemical insight to a specialized area of research. We also aim to provide a community forum for issues of importance to all chemists, regardless of sub-discipline.
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