A Protein with Unknown Function, Ps495620, Is Critical for the Sporulation and Oospore Production of Phytophthora sojae.

IF 4.2 2区 生物学 Q2 MICROBIOLOGY Journal of Fungi Pub Date : 2024-12-27 DOI:10.3390/jof11010012
Xiaoran Du, Yan Zeng, Yiying Li, Qin Peng, Jianqiang Miao, Xili Liu
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Abstract

While the rapid rise in bioinformatics has facilitated the identification of the domains and functions of many proteins, some still have no domain annotation or largely uncharacterized functions. However, the biological roles of unknown proteins were not clear in oomycetes. An analysis of the Phytophthora sojae genome database identified the protein Ps495620, which has no domain annotations and functional predictions in Phytophthora. This study used a CRISPR/Cas9-mediated gene replacement system to knock out Ps495620 to elucidate its function. The Ps495620-knockout mutants exhibited significantly increased oospore production and decreased sporangium formation compared to the wild-type strain P6497. Transcriptomics showed that it is a key regulator of nitrogen, pyruvate, ascorbate, and adorate metabolism in P. sojae. Our findings indicate that Ps495620 is critical in regulating sporangium formation and oospore production in P. sojae.

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功能未知蛋白Ps495620对大豆疫霉产孢和卵孢子至关重要。
虽然生物信息学的快速发展促进了许多蛋白质结构域和功能的识别,但有些蛋白质仍然没有结构域注释或大部分未表征的功能。然而,未知蛋白在卵菌中的生物学作用尚不清楚。通过对大豆疫霉基因组数据库的分析,鉴定出该蛋白Ps495620,该蛋白在疫霉中没有结构域注释和功能预测。本研究使用CRISPR/ cas9介导的基因替代系统敲除Ps495620以阐明其功能。与野生型菌株P6497相比,敲除ps495620的突变体表现出明显增加的卵孢子产量和减少的孢子囊形成。转录组学表明,它是大豆中氮、丙酮酸、抗坏血酸和脂肪代谢的关键调节因子。我们的研究结果表明,Ps495620在大豆孢囊的形成和卵孢子的产生中起着关键作用。
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来源期刊
Journal of Fungi
Journal of Fungi Medicine-Microbiology (medical)
CiteScore
6.70
自引率
14.90%
发文量
1151
审稿时长
11 weeks
期刊介绍: Journal of Fungi (ISSN 2309-608X) is an international, peer-reviewed scientific open access journal that provides an advanced forum for studies related to pathogenic fungi, fungal biology, and all other aspects of fungal research. The journal publishes reviews, regular research papers, and communications in quarterly issues. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on paper length. Full experimental details must be provided so that the results can be reproduced.
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