Revealing Molecular Diagnosis With Whole Exome Sequencing in Patients With Inherited Retinal Disorders

IF 2.3 3区 医学 Q2 GENETICS & HEREDITY Clinical Genetics Pub Date : 2025-01-24 DOI:10.1111/cge.14708
Cuneyd Yavas, Yunus Emre Arvas, Mustafa Dogan, Alper Gezdirici, Elif Sibel Aslan, Murat Karapapak, Savas Barıs, Recep Eroz
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Abstract

Inherited retinal diseases (IRDs) constitute a heterogeneous group of clinically and genetically diverse conditions, standing as a primary cause of visual impairment among individuals aged 15–45, with an estimated incidence of 1:2000. Our study aimed to comprehensively evaluate the genetic variants underlying IRDs in the Turkish population. This study included 50 unrelated Turkish IRD patients and their families. Genomic DNA was extracted from each participant, and candidate variants were identified via next-generation sequencing to determine their pathogenicity. We detected variants in 58% of the patients, of which six novel variants were identified. Among these, 16 cases exhibited variants associated with retinitis pigmentosa and Stargardt disease, while 13 presented variants linked to other retinal diseases. The spectrum of identified variants included 21 homozygous cases and five compound heterozygous variants, both indicative of autosomal recessive inheritance. Three cases revealed heterozygous variants suggestive of autosomal dominant inheritance, and two cases featured hemizygous variants suggestive of X-linked inheritance. Importantly, no matches with copy number variants were detected in our analysis. This study comprehensively portrays clinical and genetic profiles within the Turkish population affected by IRDs. Identifying novel variants and delineating inheritance patterns contribute to a deeper understanding of the genetic diagnosis of IRDs, paving the way for more precise diagnostic and therapeutic interventions.

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揭示遗传性视网膜疾病患者全外显子组测序的分子诊断。
遗传性视网膜疾病(IRDs)是一组临床和遗传上多种多样的疾病,是造成 15-45 岁人群视力损伤的主要原因,估计发病率为 1:2000。我们的研究旨在全面评估土耳其人群中 IRD 的遗传变异。这项研究包括 50 名无亲属关系的土耳其 IRD 患者及其家属。我们从每位参与者身上提取了基因组 DNA,并通过下一代测序鉴定了候选变体,以确定其致病性。我们在 58% 的患者中检测到了变异体,其中发现了 6 个新型变异体。其中,16 例患者的变异与视网膜色素变性和斯塔加特病有关,13 例患者的变异与其他视网膜疾病有关。已发现的变异体包括 21 个同卵变异体和 5 个复合杂合变异体,均为常染色体隐性遗传。三个病例的杂合子变异提示为常染色体显性遗传,两个病例的半杂合子变异提示为 X 连锁遗传。重要的是,在我们的分析中没有发现与拷贝数变异匹配的病例。这项研究全面描述了土耳其 IRD 患者的临床和遗传特征。识别新型变异和描述遗传模式有助于加深对 IRD 遗传诊断的理解,为更精确的诊断和治疗干预铺平道路。
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来源期刊
Clinical Genetics
Clinical Genetics 医学-遗传学
CiteScore
6.50
自引率
0.00%
发文量
175
审稿时长
3-8 weeks
期刊介绍: Clinical Genetics links research to the clinic, translating advances in our understanding of the molecular basis of genetic disease for the practising clinical geneticist. The journal publishes high quality research papers, short reports, reviews and mini-reviews that connect medical genetics research with clinical practice. Topics of particular interest are: • Linking genetic variations to disease • Genome rearrangements and disease • Epigenetics and disease • The translation of genotype to phenotype • Genetics of complex disease • Management/intervention of genetic diseases • Novel therapies for genetic diseases • Developmental biology, as it relates to clinical genetics • Social science research on the psychological and behavioural aspects of living with or being at risk of genetic disease
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