Exploring the Capability of Mechanically Interlocked Molecules in Anion Recognition: A Computational Insight.

IF 4.3 Q2 CHEMISTRY, PHYSICAL ACS Physical Chemistry Au Pub Date : 2024-12-10 eCollection Date: 2025-01-22 DOI:10.1021/acsphyschemau.4c00089
Fábio J Amorim, Giovanni F Caramori
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Abstract

The present study elucidated the role of both hydrogen and halogen bonds, from an electronic structure perspective, in the anion recognition process by the [2]catenane (1) containing a moiety with hydrogen bond donors entangled with another macrocyclic halogen bond donor. Spherical and nonspherical anions have been employed. The roles of different σ-hole donors have also been considered. The structure of 1 was modified by incorporating other σ-hole donors, namely bromine, chlorine, fluorine, as well as -Te-CH3 as a chalcogen bond donor, leading to the modified [2]catenanes 2-5. Insights into anion recognition were gained by quantifying the contributions of not only the mechanical but also hydrogen and halogen/chalcogen bonds to anion recognition using the GKS-EDA energy partition scheme and homodesmostic reactions scheme. GKS-EDA reveals that the anions Cl- and TS- exhibit the most stabilizing interactions with the 1 binding pocket. The EDA results confirm that by changing from a stronger σ-hole donor (I) to a weaker σ-hole donor (F) will have a considerable impact on anion interaction, thereby demonstrating that the halogen bonds formed between the [2]catenane and the anion play a pivotal role.

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探索机械互锁分子在阴离子识别中的能力:一个计算的洞察力。
本研究从电子结构的角度阐明了氢键和卤素键在[2]链烷(1)的阴离子识别过程中的作用,[2]链烷(1)含有一个氢键给体与另一个大环卤素键给体纠缠的片段。球形和非球形阴离子都有使用。本文还考虑了不同σ-空穴供体的作用。通过加入其他的σ-空穴给体,即溴、氯、氟和-Te-CH3作为硫键给体,对1的结构进行了修饰,得到了改性的[2]链烷2-5。通过使用GKS-EDA能量分配方案和同调反应方案量化氢键和卤/硫键对阴离子识别的贡献,获得了对阴离子识别的深入了解。GKS-EDA显示阴离子Cl-和TS-与1结合口袋表现出最稳定的相互作用。EDA结果证实,从较强的σ-空穴给体(I)转变为较弱的σ-空穴给体(F)将对阴离子相互作用产生相当大的影响,从而表明[2]链烷与阴离子之间形成的卤素键起关键作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
3.70
自引率
0.00%
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0
期刊介绍: ACS Physical Chemistry Au is an open access journal which publishes original fundamental and applied research on all aspects of physical chemistry. The journal publishes new and original experimental computational and theoretical research of interest to physical chemists biophysical chemists chemical physicists physicists material scientists and engineers. An essential criterion for acceptance is that the manuscript provides new physical insight or develops new tools and methods of general interest. Some major topical areas include:Molecules Clusters and Aerosols; Biophysics Biomaterials Liquids and Soft Matter; Energy Materials and Catalysis
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