Transcript Changes of Placental Tissue in Gestational Diabetes Mellitus Based on Transcriptome Sequencing.

IF 3 3区 医学 Q3 ENDOCRINOLOGY & METABOLISM Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy Pub Date : 2025-01-25 eCollection Date: 2025-01-01 DOI:10.2147/DMSO.S479803
Yun Sun, Yi Wang, Chao Liu, Jie Yang, Qinwen Li, Fei Zhao
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Abstract

Purpose: This study aims to identify key genes that may be involved in the pathogenesis of gestational diabetes mellitus and to preliminarily elucidate the underlying mechanisms.

Methods: High-throughput transcriptome sequencing was employed to identify Differentially expressed genes (DEGs) in placental tissue samples of GDM and normal pregnant women. Functional and pathway analyses of these DEGs were conducted using bioinformatics databases. Significant DEGs were validated through real-time quantitative PCR in conjunction with relevant literature.

Results: In comparison to the normal pregnancy group, 435 DEGs were identified in the GDM group, comprising 128 upregulated and 307 downregulated genes. GO enrichment analysis revealed that DEGs were primarily associated with biological processes, such as cellular processes, biological regulation, regulation of biological processes, and response to stimuli. Cell component enrichment analysis indicated their association with cellular anatomical entities and protein-containing complexes. Molecular function enrichment analysis highlighted their roles in binding and catalytic activities. KEGG pathway enrichment analysis indicated the involvement of DEGs in signalling pathways related to PI3K-Akt signaling pathway and ECM-receptor interaction. qRT-PCR validation of five randomly selected DEGs confirmed consistent expression trends with RNA-Seq quantification.

Conclusion: YWHAB, LEP, CCL21, PAPPA2, and SFN may be potential biological markers for the diagnosis of GDM, involved in the occurrence and development of GDM, and have certain value for disease prediction and diagnosis.

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基于转录组测序的妊娠期糖尿病胎盘组织转录物变化
目的:寻找可能参与妊娠期糖尿病发病的关键基因,并初步阐明其发病机制。方法:采用高通量转录组测序技术,鉴定GDM和正常孕妇胎盘组织样本中的差异表达基因(DEGs)。利用生物信息学数据库对这些基因的功能和通路进行了分析。通过实时定量PCR结合相关文献验证了显著的deg。结果:与正常妊娠组相比,GDM组共检测到435个deg,其中上调基因128个,下调基因307个。氧化石墨烯富集分析表明,deg主要与生物过程有关,如细胞过程、生物调节、生物过程调节和对刺激的反应。细胞成分富集分析表明它们与细胞解剖实体和含蛋白复合物有关。分子功能富集分析强调了它们在结合和催化活性中的作用。KEGG通路富集分析表明,deg参与PI3K-Akt信号通路和ecm受体相互作用相关的信号通路。随机选择的5个deg的qRT-PCR验证证实了与RNA-Seq定量一致的表达趋势。结论:YWHAB、LEP、CCL21、PAPPA2、SFN可能是诊断GDM的潜在生物学标志物,参与了GDM的发生发展,对疾病的预测和诊断具有一定的价值。
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来源期刊
Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy
Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy Pharmacology, Toxicology and Pharmaceutics-Pharmacology
CiteScore
5.90
自引率
6.10%
发文量
431
审稿时长
16 weeks
期刊介绍: An international, peer-reviewed, open access, online journal. The journal is committed to the rapid publication of the latest laboratory and clinical findings in the fields of diabetes, metabolic syndrome and obesity research. Original research, review, case reports, hypothesis formation, expert opinion and commentaries are all considered for publication.
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