Synthetic mycolates derivatives to decipher protein mycoloylation, a unique post-translational modification in bacteria.

IF 4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biological Chemistry Pub Date : 2025-03-01 Epub Date: 2025-01-27 DOI:10.1016/j.jbc.2025.108243
Emilie Lesur, Yijie Zhang, Nathalie Dautin, Christiane Dietrich, Ines Li de la Sierra-Gallay, Luis A Augusto, Paulin Rollando, Noureddine Lazar, Dominique Urban, Gilles Doisneau, Florence Constantinesco-Becker, Herman Van Tilbeurgh, Dominique Guianvarc'h, Yann Bourdreux, Nicolas Bayan
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Abstract

Protein mycoloylation is a newly characterized post-translational modification (PTM) specifically found in Corynebacteriales, an order of bacteria that includes numerous human pathogens. Their envelope is composed of a unique outer membrane, the so-called mycomembrane made of very-long chain fatty acids, named mycolic acids. Recently, some mycomembrane proteins including PorA have been unambiguously shown to be covalently modified with mycolic acids in the model organism Corynebacterium glutamicum by a mechanism that relies on the mycoloyltransferase MytC. This PTM represents the first example of protein O-acylation in prokaryotes and the first example of protein modification by mycolic acid. Through the design and synthesis of trehalose monomycolate (TMM) analogs, we prove that i) MytC is the mycoloyltransferase directly involved in this PTM, ii) TMM, but not trehalose dimycolate (TDM), is a suitable mycolate donor for PorA mycoloylation, iii) MytC is able to discriminate between an acyl and a mycoloyl chain in vitro unlike other trehalose mycoloyltransferases. We also solved the structure of MytC acyl-enzyme obtained with a soluble short TMM analogs which constitutes the first mycoloyltransferase structure covalently linked to an authentic mycolic acid moiety. These data highlight the great conformational flexibility of the active site of MytC during the reaction cycle and pave the way for a better understanding of the catalytic mechanism of all members of the mycoloyltransferase family including the essential Antigen85 enzymes in Mycobacteria.

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合成真菌衍生物来破译蛋白质的真菌化,这是一种独特的细菌翻译后修饰。
蛋白mycolylation是一种新发现的翻译后修饰(PTM),特别是在棒状杆菌中发现,棒状杆菌是一种包括许多人类病原体的细菌。它们的包膜是由一种独特的外膜组成的,这种所谓的菌膜是由长链脂肪酸组成的,叫做霉菌酸。最近,包括PorA在内的一些菌膜蛋白已被明确地证明在模式生物谷氨酸棒状杆菌中通过一种依赖于mycoloyltransferase MytC的机制与霉菌酸共价修饰。该PTM代表了原核生物中蛋白质o -酰化的第一个例子,也是霉菌酸修饰蛋白质的第一个例子。通过设计和合成海藻糖单菌酸(TMM)类似物,我们证明了i) MytC是直接参与该PTM的mycolyl转移酶,ii) TMM而不是海藻糖二菌酸(TDM)是PorA mycolyl化的合适的mycolate供体,iii) MytC能够在体外区分酰基和mycolyl链,这与其他海藻糖mycolyl转移酶不同。我们还用可溶性短TMM类似物获得了MytC酰基酶的结构,它构成了第一个与真正的霉菌酸片段共价连接的MytC酰基转移酶结构。这些数据突出了MytC活性位点在反应周期中的巨大构象灵活性,并为更好地理解分枝杆菌中所有mycoloyltransferase家族成员(包括必需的Antigen85酶)的催化机制铺平了道路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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Journal of Biological Chemistry
Journal of Biological Chemistry Biochemistry, Genetics and Molecular Biology-Biochemistry
自引率
4.20%
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1233
期刊介绍: The Journal of Biological Chemistry welcomes high-quality science that seeks to elucidate the molecular and cellular basis of biological processes. Papers published in JBC can therefore fall under the umbrellas of not only biological chemistry, chemical biology, or biochemistry, but also allied disciplines such as biophysics, systems biology, RNA biology, immunology, microbiology, neurobiology, epigenetics, computational biology, ’omics, and many more. The outcome of our focus on papers that contribute novel and important mechanistic insights, rather than on a particular topic area, is that JBC is truly a melting pot for scientists across disciplines. In addition, JBC welcomes papers that describe methods that will help scientists push their biochemical inquiries forward and resources that will be of use to the research community.
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