Whole genome sequence data of Trichoderma yunnanense strain TM10, a plant growth-promoting fungus and biocontrol agent

IF 1.4 Q3 MULTIDISCIPLINARY SCIENCES Data in Brief Pub Date : 2025-02-01 Epub Date: 2025-01-09 DOI:10.1016/j.dib.2025.111283
Dedat Prismantoro , Kah-Ooi Chua , Kelly Wan-Ee Teo , Rosamond Chan , Thomas Argyarich Jefferson , Nurul Shamsinah Mohd Suhaimi , Muhamad Shakirin Mispan , Mia Miranti , Febri Doni
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Abstract

Trichoderma yunnanense strain TM10 was isolated from rhizosphere soil of rice plants cultivated under system of rice intensification (SRI) practises in West Java, Indonesia. It exhibits significant potential as a plant growth promoter and biocontrol agent in rice plants. Although this strain has shown promise in promoting plant growth and suppressing phytopathogens under in vitro and in planta conditions, there is still a lack of genomic data to elucidate the molecular mechanisms underlying its plant growth-promoting and biocontrol capabilities. This study reports the whole genome sequence of T. yunnanense strain TM10. The genome of the fungus was sequenced using the MGI DNBSEQ-G400 high-throughput sequencing platform. The assembled genome of T. yunnanense strain TM10 was approximately 36 Mbp in length, comprising 385 contigs with a GC content of 48 % and a sequencing coverage of 43.8×. This genomic data provides a foundation for harnessing the plant growth-promoting and biocontrol potential of this strain. The complete genome sequence has been deposited at the National Center for Biotechnology Information (NCBI) under Bioproject accession number PRJNA1181959, BioSample ID SAMN44575400, and genome accession number JBIYZQ000000000. These data are valuable for further research into the biotechnological potential of this strain and for exploring the molecular mechanisms underlying its plant growth-promoting and biocontrol activities.

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植物促生菌、防生剂云南木霉TM10株全基因组序列数据。
从印尼西爪哇水稻集约化栽培的水稻根际土壤中分离到云南木霉TM10菌株。在水稻中作为植物生长促进剂和生物防治剂具有重要的应用潜力。尽管该菌株在体外和植物条件下显示出促进植物生长和抑制植物病原体的前景,但仍缺乏基因组数据来阐明其促进植物生长和生物防治能力的分子机制。本研究报道了云南结核杆菌菌株TM10的全基因组序列。利用MGI DNBSEQ-G400高通量测序平台对真菌基因组进行测序。云南T. yunnanense菌株TM10的基因组全长约36 Mbp,包含385个contigs, GC含量为48%,测序覆盖率为43.8 x。这些基因组数据为利用该菌株促进植物生长和生物防治潜力提供了基础。完整的基因组序列已存入国家生物技术信息中心(NCBI),生物项目登录号为PRJNA1181959,生物样本ID为SAMN44575400,基因组登录号为JBIYZQ000000000。这些数据对进一步研究该菌株的生物技术潜力和探索其促进植物生长和生物防治活性的分子机制具有重要价值。
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来源期刊
Data in Brief
Data in Brief MULTIDISCIPLINARY SCIENCES-
CiteScore
3.10
自引率
0.00%
发文量
996
审稿时长
70 days
期刊介绍: Data in Brief provides a way for researchers to easily share and reuse each other''s datasets by publishing data articles that: -Thoroughly describe your data, facilitating reproducibility. -Make your data, which is often buried in supplementary material, easier to find. -Increase traffic towards associated research articles and data, leading to more citations. -Open up doors for new collaborations. Because you never know what data will be useful to someone else, Data in Brief welcomes submissions that describe data from all research areas.
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