{"title":"Cover Picture and Issue Information","authors":"","doi":"10.1111/2041-210X.14344","DOIUrl":null,"url":null,"abstract":"<p>This month's cover image features a 72 square meter orthomosaic of a coral reef automatically segmented and classified using RapidBenthos. Developed by Remmers et al., this innovative workflow uses machine learning for feature extraction and analyses of photogrammetric data from underwater orthomosaics of coral reefs. The automated workflow integrates the Segment Anything Model (SAM) and ReefCloud point annotation in a two-stage process: (1) employing a pre-trained, open-source machine learning segmentation model, which removes the need for users to manually generate fine-scale segmented training data, and (2) classifying the resulting segments using the underlying survey images from multiple viewpoints, achieving classification at higher taxonomic levels. This study demonstrates that artificial intelligence tools can automatically and reliably extract data from orthomosaics with an unprecedented level of taxonomic detail and accuracy. While the approach has been developed and tested on images from a shallow coral reef, it has the potential to be applied to any ecosystem monitored via photogrammetry and is scalable for large-area applications. Such advancements enable the sustainable scaling of photogrammetric monitoring techniques, offering a more comprehensive understanding of coral reefs community composition and habitat. In turn, this will inspire new research questions, enhance ecosystem models, and support improved ecosystem management.\n <figure>\n <div><picture>\n <source></source></picture><p></p>\n </div>\n </figure></p>","PeriodicalId":208,"journal":{"name":"Methods in Ecology and Evolution","volume":"16 2","pages":"247-249"},"PeriodicalIF":6.3000,"publicationDate":"2025-02-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/2041-210X.14344","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Methods in Ecology and Evolution","FirstCategoryId":"93","ListUrlMain":"https://besjournals.onlinelibrary.wiley.com/doi/10.1111/2041-210X.14344","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ECOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
This month's cover image features a 72 square meter orthomosaic of a coral reef automatically segmented and classified using RapidBenthos. Developed by Remmers et al., this innovative workflow uses machine learning for feature extraction and analyses of photogrammetric data from underwater orthomosaics of coral reefs. The automated workflow integrates the Segment Anything Model (SAM) and ReefCloud point annotation in a two-stage process: (1) employing a pre-trained, open-source machine learning segmentation model, which removes the need for users to manually generate fine-scale segmented training data, and (2) classifying the resulting segments using the underlying survey images from multiple viewpoints, achieving classification at higher taxonomic levels. This study demonstrates that artificial intelligence tools can automatically and reliably extract data from orthomosaics with an unprecedented level of taxonomic detail and accuracy. While the approach has been developed and tested on images from a shallow coral reef, it has the potential to be applied to any ecosystem monitored via photogrammetry and is scalable for large-area applications. Such advancements enable the sustainable scaling of photogrammetric monitoring techniques, offering a more comprehensive understanding of coral reefs community composition and habitat. In turn, this will inspire new research questions, enhance ecosystem models, and support improved ecosystem management.
这个月的封面图片是用RapidBenthos自动分割和分类的72平方米的珊瑚礁正射影。这个创新的工作流程由Remmers等人开发,使用机器学习对水下珊瑚礁正形图的摄影测量数据进行特征提取和分析。自动化工作流程将Segment Anything Model (SAM)和ReefCloud点标注集成为两个阶段的过程:(1)采用预训练的开源机器学习分割模型,该模型消除了用户手动生成精细分割训练数据的需要;(2)使用来自多个视点的底层调查图像对结果片段进行分类,实现更高分类水平的分类。该研究表明,人工智能工具能够以前所未有的分类细节和准确性自动可靠地从正形图中提取数据。虽然该方法已经在浅层珊瑚礁的图像上进行了开发和测试,但它有可能应用于通过摄影测量监测的任何生态系统,并且可扩展到大面积应用。这些进步使摄影测量监测技术的可持续缩放成为可能,使人们对珊瑚礁群落组成和栖息地有了更全面的了解。反过来,这将激发新的研究问题,增强生态系统模型,并支持改善生态系统管理。
期刊介绍:
A British Ecological Society journal, Methods in Ecology and Evolution (MEE) promotes the development of new methods in ecology and evolution, and facilitates their dissemination and uptake by the research community. MEE brings together papers from previously disparate sub-disciplines to provide a single forum for tracking methodological developments in all areas.
MEE publishes methodological papers in any area of ecology and evolution, including:
-Phylogenetic analysis
-Statistical methods
-Conservation & management
-Theoretical methods
-Practical methods, including lab and field
-This list is not exhaustive, and we welcome enquiries about possible submissions. Methods are defined in the widest terms and may be analytical, practical or conceptual.
A primary aim of the journal is to maximise the uptake of techniques by the community. We recognise that a major stumbling block in the uptake and application of new methods is the accessibility of methods. For example, users may need computer code, example applications or demonstrations of methods.