Structural, thermodynamic, and kinetic analysis of CO2 binding with cucurbiturils (CB[4], CB[5], CB[6]): A DFT computational study

IF 3 3区 化学 Q3 CHEMISTRY, PHYSICAL Computational and Theoretical Chemistry Pub Date : 2025-02-01 Epub Date: 2024-12-15 DOI:10.1016/j.comptc.2024.115043
Mohammed I. Alomari , Taher S. Ababneh , Jamal N. Dawoud
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Abstract

The adsorption characteristics and structural dynamics of CO2 within the cavities of three cucurbiturils—CB[4], CB[5], and CB[6]—have been examined using DFT calculations, specifically APF-D and ωB97XD functionals with the 6-31+G(d) and aug-cc-pVTZ basis sets. The CO2 adsorption configurations reveal two minimal-energy poses: a vertical alignment at the entrance and a horizontal alignment at the center of the host molecule. The quantum chemical results suggest a stronger affinity for CO2 adsorption in the larger cucurbiturils compared to their smaller counterparts. The strongest interaction energy among all binding sites is observed for CO2 located at the portal of CB[5], with an interaction energy of approximately −40 kJ/mol. At the center of host molecules, CB[6] demonstrates the strongest attractive energy toward CO2 and achieves the highest adsorption rate. Conversely, CO2 capture in smaller cucurbiturils, such as CB[4], is less effective due to their smaller cavity size. The encapsulation efficiency follows the trend CB[6] > CB[5] > CB[4]. The interaction between the host and guest is identified as van der Waals, as indicated by natural bond orbital (NBO) analysis.

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CO2与葫芦烷(CB[4], CB[5], CB[6])结合的结构、热力学和动力学分析:DFT计算研究
利用DFT计算,特别是以6-31+G(d)和8 -cc- pvtz为基集的APF-D和ωB97XD泛函,研究了三种葫芦类化合物CB[4]、CB[5]和CB[6]的腔内CO2的吸附特性和结构动力学。CO2吸附构型揭示了两种能量最小的姿态:在入口的垂直排列和在宿主分子中心的水平排列。量子化学结果表明,与较小的葫芦皮相比,较大的葫芦皮具有更强的CO2吸附亲和力。在所有结合位点中,位于CB[5]入口的CO2的相互作用能最强,其相互作用能约为−40 kJ/mol。在寄主分子中心,CB[6]对CO2表现出最强的吸引能,吸附速率最高。相反,在较小的葫芦壳(如CB b[4])中,由于其腔尺寸较小,CO2捕获效果较差。封装效率遵循趋势CB[6] >;CB[5]比;CB[4]。通过自然键轨道(NBO)分析,确定了主客体之间的相互作用为范德华作用。
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来源期刊
CiteScore
4.20
自引率
10.70%
发文量
331
审稿时长
31 days
期刊介绍: Computational and Theoretical Chemistry publishes high quality, original reports of significance in computational and theoretical chemistry including those that deal with problems of structure, properties, energetics, weak interactions, reaction mechanisms, catalysis, and reaction rates involving atoms, molecules, clusters, surfaces, and bulk matter.
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