Crystal synthesizability prediction using contrastive positive unlabeled learning

IF 3.4 2区 物理与天体物理 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer Physics Communications Pub Date : 2025-03-01 Epub Date: 2024-12-07 DOI:10.1016/j.cpc.2024.109465
Tao Sun , Jianmei Yuan
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引用次数: 0

Abstract

High-throughput screening or generative models rapidly identify crystal structures with the desired properties, but the synthesizable ratio is generally low. Experimentally verifying the synthesizability of individual virtual crystals would entail significant time and resources. Therefore, a method for automatically assessing the synthesizability of virtual crystals is urgently needed. This paper describes an approach that combines contrastive learning and positive unlabeled learning. The resulting contrastive positive unlabeled learning (CPUL) model predicts the crystal-likeness score (CLscore) of virtual materials. The model achieves a true positive (CLscore > 0.5) prediction accuracy of 93.95% on a test set containing 10,000 materials taken from the Materials Project (MP) database. We further validate the model by using all Fe-containing materials from the MP database as the test set, obtaining a true positive rate of 88.89%. This indicates that the CPUL model performs well, even with limited knowledge of the interactions between Fe and the atoms in the crystals. The CPUL model is then used to assess the CLscore of virtual crystals in the MP database and analyze their synthesizability by combining the energy above the hull. Finally, the synthesizability of perovskite materials is predicted using the proposed CPUL model, resulting in seven candidate halide perovskite materials for photovoltaic applications.
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利用对比正无标记学习预测晶体合成能力
高通量筛选或生成模型可快速识别具有所需性质的晶体结构,但可合成率通常较低。实验验证单个虚拟晶体的可合成性需要大量的时间和资源。因此,迫切需要一种自动评估虚拟晶体可合成性的方法。本文描述了一种结合对比学习和积极无标签学习的方法。所得到的对比正无标记学习(CPUL)模型预测了虚拟材料的晶体相似分数(CLscore)。该模型实现真正(CLscore >;0.5)在包含从materials Project (MP)数据库中获取的10,000种材料的测试集上预测精度为93.95%。我们使用MP数据库中所有含铁材料作为测试集进一步验证模型,获得了88.89%的真阳性率。这表明,即使对晶体中铁和原子之间的相互作用了解有限,CPUL模型也表现良好。然后利用CPUL模型评估MP数据库中虚拟晶体的CLscore,并结合船体上方的能量分析它们的可合成性。最后,利用所提出的CPUL模型预测了钙钛矿材料的可合成性,得到了7种可用于光伏应用的卤化物钙钛矿候选材料。
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来源期刊
Computer Physics Communications
Computer Physics Communications 物理-计算机:跨学科应用
CiteScore
12.10
自引率
3.20%
发文量
287
审稿时长
5.3 months
期刊介绍: The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper. Computer Programs in Physics (CPiP) These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged. Computational Physics Papers (CP) These are research papers in, but are not limited to, the following themes across computational physics and related disciplines. mathematical and numerical methods and algorithms; computational models including those associated with the design, control and analysis of experiments; and algebraic computation. Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.
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