A Python code for simulations of RHEED intensity oscillations within the one-dimensional dynamical approximation

IF 3.4 2区 物理与天体物理 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer Physics Communications Pub Date : 2025-03-01 Epub Date: 2024-12-09 DOI:10.1016/j.cpc.2024.109467
Andrzej Daniluk, Bartłomiej Daniluk, Grzegorz M. Wójcik
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Abstract

We present a Python-based implementation of a practical procedure of construction of simulation program, which facilitates the calculation of changes to the intensity of RHEED oscillations in the function of the glancing angle of incidence of the electron beam, employing various models of crystal potential for heteroepitaxial structures including the possible existence of various diffuse scattering models through the layer parallel to the surface. The calculations are based on the use of a one-dimensional dynamical diffraction theory. Although this theory has some limitations, in practice it is useful under so-called one-beam condition. Computation performance has been improved by using Numba as an open source, NumPy-aware optimising compiler for Python.

Program Summary

Program Title: PY_RHEED_DIFF
CPC Library link to program files: https://doi.org/10.17632/j6jxt9yr3b.1
Licensing provisions: GNU General Public License 3
Programming language: Python 3.12.7
Journal reference of previous version: Computer Physics Communications 185 (2014) 3001–3009
Does the new version supersede the previous version?: Yes.
Reasons for the new version: Python, as a powerful, accessible and general-purpose programming language, has gained tremendous popularity in recent years. Python is characterised by a remarkable simplicity that makes it an ideal choice for users for whom knowledge of high-level programming techniques is not the most important in research work. According to users’ suggestions we have developed a Python-based implementation of generic computational model for simulations of changes to the intensity of RHEED oscillations in the function of the glancing angle of incidence of the electron beam, employing various models of crystal potential for heteroepitaxial structures including the possible existence of various diffuse scattering models through the layer parallel to the surface. This version implements improvements for ergonomics, computational performances, readability, and code functionality by adding new capabilities which make the output data generation and visualisation process much more efficient compared to the previous version.
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在一维动态近似中模拟RHEED强度振荡的Python代码
我们提出了一种基于python的实用程序构建仿真程序,该程序便于计算RHEED振荡强度随电子束入射角函数的变化,采用异质外延结构的各种晶体电位模型,包括平行于表面的层中可能存在的各种漫射散射模型。计算是基于一维动态衍射理论。虽然这个理论有一定的局限性,但在实际中,它在所谓的单光束条件下是有用的。通过使用Numba作为开源的、numpy感知的Python优化编译器,计算性能得到了提高。程序摘要程序标题:PY_RHEED_DIFFCPC库链接到程序文件:https://doi.org/10.17632/j6jxt9yr3b.1Licensing条款:GNU通用公共许可证3编程语言:Python 3.12.7以前版本的期刊参考:计算机物理通信185(2014)3001 - 3009新版本是否取代以前的版本?:是的。新版本的原因:Python作为一种功能强大、易于访问和通用的编程语言,近年来获得了极大的普及。Python的特点是非常简单,这使得它成为那些在研究工作中不太需要高级编程技术知识的用户的理想选择。根据用户的建议,我们开发了一个基于python的通用计算模型,用于模拟RHEED振荡强度随电子束入射角的变化,采用各种异质外延结构的晶体电位模型,包括平行于表面的层中可能存在的各种漫射散射模型。此版本通过添加新功能实现了人体工程学,计算性能,可读性和代码功能的改进,使输出数据生成和可视化过程比以前的版本更有效。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Computer Physics Communications
Computer Physics Communications 物理-计算机:跨学科应用
CiteScore
12.10
自引率
3.20%
发文量
287
审稿时长
5.3 months
期刊介绍: The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper. Computer Programs in Physics (CPiP) These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged. Computational Physics Papers (CP) These are research papers in, but are not limited to, the following themes across computational physics and related disciplines. mathematical and numerical methods and algorithms; computational models including those associated with the design, control and analysis of experiments; and algebraic computation. Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.
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