Prediction of copper contamination in soil across EU using spectroscopy and machine learning: Handling class imbalance problem

IF 5.7 Q1 AGRICULTURAL ENGINEERING Smart agricultural technology Pub Date : 2025-03-01 Epub Date: 2024-12-16 DOI:10.1016/j.atech.2024.100728
Chongchong Qi , Nana Zhou , Tao Hu , Mengting Wu , Qiusong Chen , Han Wang , Kejing Zhang , Zhang Lin
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Abstract

Soil copper (Cu) pollution is a significant global environmental challenge, necessitating accurate assessment methods for effective control. However, existing classification approaches for Cu content in soil spectral datasets often face imbalances in data distribution, resulting in unreliable identification of Cu-contaminated samples. To address this limitation, we conducted a comprehensive evaluation of three basic machine learning (ML) algorithms and four imbalanced ML algorithms. These methods were used to develop seven continental-scale models for imbalanced classification of soil Cu contamination using visible and near-infrared reflectance spectroscopy. A dataset comprising 18,675 topsoil samples was utilized for training and validation. Hyperparameter optimization was applied to enhance model performance, and multiple statistical metrics were employed for evaluation. Furthermore, feature importance analysis identified key spectral bands influencing Cu classification. Among the tested models, the BalancedRandomForest algorithm demonstrated superior classification performance and generalization ability, achieving an area under the curve of 0.870, recall of 0.816, and balanced accuracy of 0.793. Spectral analysis highlighted the 2310–2320 nm as the most critical spectral region for Cu classification. This study underscores the utility of the optimized model for managing soil Cu pollution and provides a valuable reference for addressing imbalanced learning challenges in soil pollution research.

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利用光谱和机器学习预测欧盟土壤中的铜污染:处理类不平衡问题
土壤铜污染是全球性的重大环境挑战,需要准确的评价方法才能有效控制。然而,现有的土壤光谱数据中Cu含量的分类方法往往存在数据分布不平衡的问题,导致对Cu污染样品的识别不可靠。为了解决这一限制,我们对三种基本机器学习(ML)算法和四种不平衡的ML算法进行了全面评估。利用这些方法建立了7个大陆尺度模型,利用可见光和近红外反射光谱对土壤铜污染进行不平衡分类。使用包含18,675个表土样本的数据集进行训练和验证。采用超参数优化提高模型性能,并采用多种统计指标进行评价。此外,特征重要度分析确定了影响铜分类的关键光谱带。在被测试的模型中,BalancedRandomForest算法表现出较好的分类性能和泛化能力,曲线下面积为0.870,召回率为0.816,平衡准确率为0.793。光谱分析表明,2310-2320 nm是铜分类最关键的光谱区域。该研究强调了优化模型在土壤Cu污染管理中的实用性,为解决土壤污染研究中的不平衡学习挑战提供了有价值的参考。
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