Sequential transcriptome profiling: comparative analysis of normal and canine lymphoma preceding detailed T-cell and B-cell subtype comparison.

IF 2.9 2区 农林科学 Q1 VETERINARY SCIENCES Frontiers in Veterinary Science Pub Date : 2025-01-22 eCollection Date: 2024-01-01 DOI:10.3389/fvets.2024.1473421
Yeji Kim, Jihyun Kim, Yunji Song, Keunhwan Jang, Se Eun Kim, Ha-Jung Kim
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Abstract

Introduction: As the lifespan of companion animals extends, the incidence of tumor also increases. Among these tumors, lymphoma is reported as the most prevalent hematopoietic tumor with a 80-90% prevalence rate. Ongoing research spans multiple domains, aiming to uncover novel therapeutic targets, including small molecular weight inhibitors, antibody treatments, and subtype-specific selective agents.

Methods: Transcriptional profiling was performed on canine lymphoma samples to identify genes and functional pathways associated with pathogenesis, treatment response, and prognosis. Additionally, genes with potential relevance to the clinical characteristics of T-cell lymphoma (TCL), which is characterized by a low treatment response and poor prognosis, were identified through a comparative analysis of different lymphoma subtypes.

Results: Within the canine lymphoma group, HERC5 showed consistent upregulation, a gene similarly implicated in human acute myeloid leukemia but previously no reports exist. Additionally, noteworthy genes, including IKZF2, CCL4, SAA1, and CD40, exhibited differential expression in the TCL group compared to the B-cell lymphoma (BCL) group.

Discussion: The upregulation of HERC5 may impact on canine lymphoma pathogenicity. Furthermore, the upregulation of IKZF2, CCL4, and SAA1, along with the downregulation of CD40, may contribute to adverse clinical characteristics of TCL in dogs.

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序列转录组分析:在详细的t细胞和b细胞亚型比较之前,正常和犬淋巴瘤的比较分析。
随着伴侣动物寿命的延长,肿瘤的发病率也随之增加。在这些肿瘤中,淋巴瘤被报道为最常见的造血肿瘤,患病率为80-90%。正在进行的研究跨越多个领域,旨在发现新的治疗靶点,包括小分子量抑制剂,抗体治疗和亚型特异性选择性药物。方法:对犬淋巴瘤样本进行转录谱分析,以确定与发病机制、治疗反应和预后相关的基因和功能途径。此外,通过对不同淋巴瘤亚型的比较分析,发现了与治疗反应低、预后差的t细胞淋巴瘤(T-cell lymphoma, TCL)临床特征潜在相关的基因。结果:在犬淋巴瘤组中,HERC5表现出一致的上调,该基因与人类急性髓性白血病相似,但以前没有报道。此外,值得注意的基因,包括IKZF2、CCL4、SAA1和CD40,在TCL组与b细胞淋巴瘤(BCL)组中表现出差异表达。讨论:HERC5的上调可能影响犬淋巴瘤的致病性。此外,IKZF2、CCL4和SAA1的上调以及CD40的下调可能导致犬TCL的不良临床特征。
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来源期刊
Frontiers in Veterinary Science
Frontiers in Veterinary Science Veterinary-General Veterinary
CiteScore
4.80
自引率
9.40%
发文量
1870
审稿时长
14 weeks
期刊介绍: Frontiers in Veterinary Science is a global, peer-reviewed, Open Access journal that bridges animal and human health, brings a comparative approach to medical and surgical challenges, and advances innovative biotechnology and therapy. Veterinary research today is interdisciplinary, collaborative, and socially relevant, transforming how we understand and investigate animal health and disease. Fundamental research in emerging infectious diseases, predictive genomics, stem cell therapy, and translational modelling is grounded within the integrative social context of public and environmental health, wildlife conservation, novel biomarkers, societal well-being, and cutting-edge clinical practice and specialization. Frontiers in Veterinary Science brings a 21st-century approach—networked, collaborative, and Open Access—to communicate this progress and innovation to both the specialist and to the wider audience of readers in the field. Frontiers in Veterinary Science publishes articles on outstanding discoveries across a wide spectrum of translational, foundational, and clinical research. The journal''s mission is to bring all relevant veterinary sciences together on a single platform with the goal of improving animal and human health.
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