Redox-dependent hydrogen-bond network rearrangement of ferredoxin-NADP+ reductase revealed by high-resolution X-ray and neutron crystallography.

IF 1.1 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Acta crystallographica. Section F, Structural biology communications Pub Date : 2025-03-01 Epub Date: 2025-02-06 DOI:10.1107/S2053230X25000524
Midori Uenaka, Yusuke Ohnishi, Akane Ise, Jiang Yu, Naomine Yano, Katsuhiro Kusaka, Hideaki Tanaka, Genji Kurisu
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Abstract

High-resolution X-ray and neutron crystallography were employed to elucidate redox-dependent structural changes in ferredoxin-NADP+ reductase (FNR) from maize. This study focused on the rearrangement of hydrogen-bond networks upon FAD reduction. The X-ray structures of wild-type FNR in oxidized and reduced states were refined to 1.15 and 1.10 Å resolution, respectively, revealing no large structural changes in the main-chain backbones. Neutron crystallography provided complementary insights, confirming protonation at N1 and N5 of the isoalloxazine ring and visualizing hydrogen bonds that were undetectable by X-ray analysis. These findings illuminate the dynamic reorganization of water-mediated hydrogen-bond networks during redox transitions, which may underpin the redox-dependent modulation of partner binding by FNR. This integrated structural approach highlights the synergistic use of X-ray and neutron crystallography in studying redox-active proteins.

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高分辨率x射线和中子晶体学揭示的铁氧化还原蛋白- nadp +还原酶的氧化还原依赖氢键网络重排。
采用高分辨率x射线和中子晶体学研究了玉米铁氧化还原蛋白- nadp +还原酶(FNR)氧化还原依赖的结构变化。本研究的重点是氢键网络在FAD还原后的重排。野生型FNR在氧化态和还原态下的x射线结构分别细化到1.15和1.10 Å分辨率,显示主链主干没有大的结构变化。中子晶体学提供了补充的见解,证实了异alloxazine环N1和N5的质子化作用,并可视化了x射线分析无法检测到的氢键。这些发现阐明了氧化还原转变过程中水介导的氢键网络的动态重组,这可能支持了FNR对氧化还原依赖性伴侣结合的调节。这种集成的结构方法突出了x射线和中子晶体学在研究氧化还原活性蛋白质中的协同使用。
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来源期刊
Acta crystallographica. Section F, Structural biology communications
Acta crystallographica. Section F, Structural biology communications BIOCHEMICAL RESEARCH METHODSBIOCHEMISTRY &-BIOCHEMISTRY & MOLECULAR BIOLOGY
CiteScore
1.90
自引率
0.00%
发文量
95
期刊介绍: Acta Crystallographica Section F is a rapid structural biology communications journal. Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal. The journal offers the option of open access, and all communications benefit from unlimited free use of colour illustrations and no page charges. Authors are encouraged to submit multimedia content for publication with their articles. Acta Cryst. F has a dedicated online tool called publBio that is designed to make the preparation and submission of articles easier for authors.
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