The first mitochondrial genomes of stylasterid corals (Hydrozoa; Stylasteridae) and their phylogenetic position.

IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Biology Reports Pub Date : 2025-02-07 DOI:10.1007/s11033-025-10324-6
Daniela Pica, Claudio Pica, Claudia F Vaga
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Abstract

Background: Mitochondrial genomes among Medusozoa show considerable variation in the class Hydrozoa, and many phylogenetic relationships inside the subphylum remain still unresolved. Stylasteridae, one of the most species-rich families among hydrozoans, characterized by a calcareous skeleton, lacks mitochondrial genomic information, limiting our understanding of their evolution and phylogenetic position within Hydrozoa.

Methods and results: This study present the first mitochondrial genome of two stylasterid species from the genus Errina (E. aspera and E. atlantica). Total genomic DNA was extracted and sequenced using Illumina NovaSeq 6000 and mitochondrial genomes were assembled and annotated using two different methods. Results hypothesized linear genomes of 14,938 bp and 14,969 bp respectively, containing 13 protein-coding genes, 2 transfer RNA genes, and 2 ribosomal RNA genes. The gene order was congruent with other Filifera, but lacking the cox1 duplication, transposition, and inversion common in other hydrozoans. Phylogenetic analyses confirmed the position of stylasterids as a sister group to Hydractiniidae within the Filifera suborder.

Conclusions: This study provides the first information about the stylasterid mitochondrial genome structure. Moreover, the phylogenetic analysis confirms the phylogenetic position of Hydractiniidae as sister family of Stylasteridae. The new findings have highlighted the importance of sequencing additional genomic data to better unravel the evolutionary history of this significant family.

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首批石珊瑚(水螅虫;石珊瑚科)线粒体基因组及其系统发育位置。
背景:Medusozoa的线粒体基因组在水螅纲中显示出相当大的差异,并且亚门内的许多系统发育关系仍未解决。针虫科是水螅动物中种类最丰富的科之一,以钙质骨架为特征,缺乏线粒体基因组信息,限制了我们对其在水螅动物中的进化和系统发育地位的理解。方法与结果:本研究首次获得了两种棘球蕨属(E. aspera和E. atlantica)的线粒体基因组。提取总基因组DNA并使用Illumina NovaSeq 6000进行测序,使用两种不同的方法组装线粒体基因组并进行注释。结果假设线性基因组长度分别为14938 bp和14969 bp,包含13个蛋白质编码基因、2个转移RNA基因和2个核糖体RNA基因。该基因序列与其他水螅类相同,但缺乏其他水螅类常见的cox1重复、转位和倒位。系统发育分析证实了柱头甾类在Filifera亚目中是Hydractiniidae的姊妹类群。结论:本研究首次提供了柱头asterid线粒体基因组结构的相关信息。此外,系统发育分析还证实了水螅蝇科作为柱头蝇科姊妹科的系统发育地位。这些新发现强调了对额外基因组数据进行测序以更好地揭示这个重要家族的进化史的重要性。
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来源期刊
Molecular Biology Reports
Molecular Biology Reports 生物-生化与分子生物学
CiteScore
5.00
自引率
0.00%
发文量
1048
审稿时长
5.6 months
期刊介绍: Molecular Biology Reports publishes original research papers and review articles that demonstrate novel molecular and cellular findings in both eukaryotes (animals, plants, algae, funghi) and prokaryotes (bacteria and archaea).The journal publishes results of both fundamental and translational research as well as new techniques that advance experimental progress in the field and presents original research papers, short communications and (mini-) reviews.
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