A knowledge graph for crop diseases and pests in China.

IF 6.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Scientific Data Pub Date : 2025-02-06 DOI:10.1038/s41597-025-04492-0
Rongen Yan, Ping An, Xianghao Meng, Yakun Li, Dongmei Li, Fu Xu, Depeng Dang
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Abstract

A standardized representation and sharing of crop disease and pest data is crucial for enhancing crop yields, especially in China, which features vast cultivation areas and complex agricultural ecosystems. A knowledge graph for crop diseases and pests, acting as a repository of entities and relationships, is crucial conceptually for achieving unified data management. However, there is currently a lack of knowledge graphs specifically designed for this field. In this paper, we propose CropDP-KG, a knowledge graph for crop diseases and pests in China, which leverages natural language processing techniques to analyze data from the Chinese crop diseases and pests image-text database. CropDP-KG covers relevant information on crop diseases and pests in China, featuring 8 primary entities such as diseases, symptoms, and crops, and is organized into 7 relationships such as primary occurrence locations, affected parts and suitable temperature. In total, it includes 13,840 entities and 21,961 relationships. In the case studies presented in this research, we also show a versatile application of CropDP, namely a knowledge service system, and have released its codebase under an open-source license. The content of this paper provides a guide for users to build their own knowledge graphs, aiming to help them effectively reuse and extend the knowledge graphs they create.

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中国农作物病虫害知识图谱。
作物病虫害数据的标准化表示和共享对于提高作物产量至关重要,特别是在耕地面积大、农业生态系统复杂的中国。作物病虫害知识图谱作为实体和关系的存储库,在概念上对于实现统一的数据管理至关重要。然而,目前缺乏专门为这一领域设计的知识图谱。本文提出了中国作物病虫害知识图谱CropDP-KG,该图谱利用自然语言处理技术对中国作物病虫害图像-文本数据库数据进行分析。CropDP-KG收录了中国作物病虫害的相关信息,包括病害、症状、作物等8个主要实体,并按照主要发生地、受影响部位、适宜温度等7个关系进行组织。它总共包括13840个实体和21961个关系。在本研究的案例研究中,我们还展示了CropDP的通用应用,即知识服务系统,并在开源许可下发布了其代码库。本文的内容为用户构建自己的知识图谱提供了指南,旨在帮助用户有效地重用和扩展自己创建的知识图谱。
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来源期刊
Scientific Data
Scientific Data Social Sciences-Education
CiteScore
11.20
自引率
4.10%
发文量
689
审稿时长
16 weeks
期刊介绍: Scientific Data is an open-access journal focused on data, publishing descriptions of research datasets and articles on data sharing across natural sciences, medicine, engineering, and social sciences. Its goal is to enhance the sharing and reuse of scientific data, encourage broader data sharing, and acknowledge those who share their data. The journal primarily publishes Data Descriptors, which offer detailed descriptions of research datasets, including data collection methods and technical analyses validating data quality. These descriptors aim to facilitate data reuse rather than testing hypotheses or presenting new interpretations, methods, or in-depth analyses.
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