Optimizing Resource Estimation for Scientific Workflows in HPC Environments: A Layered-Bucket Heuristic Approach

IF 1.5 4区 计算机科学 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Concurrency and Computation-Practice & Experience Pub Date : 2025-02-12 DOI:10.1002/cpe.8381
Luis C. R. Alvarenga, Yuri Frota, Daniel de Oliveira, Rafaelli Coutinho
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Abstract

As computational simulations become complex and the amount of processed data grows, executing scientific workflows in High-Performance Computing (HPC) environments is increasingly essential. However, accurately estimating the required computational resources for such executions presents a significant challenge, requiring a thorough examination of the workflow structure and the characteristics of the computational environment. This manuscript introduces the GraspCC-LB heuristic, based on the Greedy Randomized Adaptive Search Procedure (GRASP), for estimating the necessary resources for executing scientific workflows in HPC environments. Unlike existing methods, GraspCC-LB incorporates the layered structure of workflows into its estimation process. The proposed approach was evaluated using real traces of workflows from the fields of bioinformatics and astronomy. The resource estimations produced by GraspCC-LB were compared against the actual resource usage in a real-world HPC environment to evaluate its effectiveness. The results demonstrate the effectiveness of GraspCC-LB as a robust approach for resource optimization in the context of large-scale scientific workflows that require HPC capabilities.

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HPC环境下科学工作流资源估计优化:一种分层桶启发式方法
随着计算模拟变得越来越复杂,处理的数据量越来越大,在高性能计算(HPC)环境中执行科学工作流变得越来越重要。然而,准确估计这些执行所需的计算资源是一项重大挑战,需要对工作流结构和计算环境的特征进行彻底检查。本文介绍了基于贪婪随机自适应搜索过程(GRASP)的GraspCC-LB启发式算法,用于估计在HPC环境中执行科学工作流所需的资源。与现有方法不同,GraspCC-LB将工作流的分层结构纳入其评估过程。使用来自生物信息学和天文学领域的工作流程的真实痕迹来评估所提出的方法。将GraspCC-LB产生的资源估计与真实HPC环境中的实际资源使用情况进行比较,以评估其有效性。结果表明,在需要高性能计算能力的大规模科学工作流程中,GraspCC-LB是一种有效的资源优化方法。
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来源期刊
Concurrency and Computation-Practice & Experience
Concurrency and Computation-Practice & Experience 工程技术-计算机:理论方法
CiteScore
5.00
自引率
10.00%
发文量
664
审稿时长
9.6 months
期刊介绍: Concurrency and Computation: Practice and Experience (CCPE) publishes high-quality, original research papers, and authoritative research review papers, in the overlapping fields of: Parallel and distributed computing; High-performance computing; Computational and data science; Artificial intelligence and machine learning; Big data applications, algorithms, and systems; Network science; Ontologies and semantics; Security and privacy; Cloud/edge/fog computing; Green computing; and Quantum computing.
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