A model of Notch signalling control of angiogenesis: Evidence of a role for Notch ligand heterodimerization.

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS PLoS Computational Biology Pub Date : 2025-02-11 eCollection Date: 2025-02-01 DOI:10.1371/journal.pcbi.1012825
Daipeng Chen, Xinxin Liu, Haijiang Wang, Roeland M H Merks, David A Baker
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Abstract

The ubiquitous Notch receptor signalling network is essential for tissue growth and maintenance. Operationally, receptor activity is regulated by two principal, counterposed mechanisms: intercellular Notch transactivation triggered by interactions between receptors and ligands expressed in neighbouring cells; intracellular cis inhibition mediated by ligands binding to receptors expressed in the same cell. Moreover, different Notch receptor/ligand combinations are known to elicit distinct molecular and cellular responses, and together, these phenomena determine the strength, the duration and the specificity of Notch receptor signalling. To date, it has been assumed that these processes involve discrete ligand homomers and not heteromeric complexes composed of more than one ligand species. In this study, we explore the molecular basis of the opposing actions of the Notch ligands, DLL4 and JAG1, which control angiogenic sprouting. Through a combination of experimental approaches and mathematical modelling, we provide evidence that two mechanisms could underpin this process: 1) DLL4 rather than JAG1 induces efficient Notch1 receptor transactivation; 2) JAG1 directly blocks DLL4-dependent cis-inhibition of Notch signalling through the formation of a JAG1/DLL4 complex. We propose a new model of Notch signalling that recapitulates the formation of tip and stalk cells, which is necessary for sprouting angiogenesis.

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Notch信号控制血管生成的模型:Notch配体异二聚化作用的证据。
无处不在的Notch受体信号网络对组织生长和维持至关重要。在操作上,受体活性受两种主要的对立机制调节:由受体和邻近细胞中表达的配体之间的相互作用触发的细胞间Notch转激活;由配体结合同一细胞中表达的受体介导的细胞内顺式抑制。此外,已知不同的Notch受体/配体组合会引发不同的分子和细胞反应,这些现象共同决定了Notch受体信号传导的强度、持续时间和特异性。迄今为止,人们一直认为这些过程涉及离散的配体异构体,而不是由一种以上配体组成的异构体。在这项研究中,我们探索了Notch配体DLL4和JAG1的分子基础,这些配体控制血管新生发芽。通过实验方法和数学模型的结合,我们提供了两种机制可以支持这一过程的证据:1)DLL4而不是JAG1诱导高效的Notch1受体转激活;2) JAG1通过形成JAG1/DLL4复合物直接阻断DLL4依赖性的Notch信号顺式抑制。我们提出了一个新的Notch信号模型,它概括了茎尖和茎尖细胞的形成,这是发芽血管生成所必需的。
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来源期刊
PLoS Computational Biology
PLoS Computational Biology BIOCHEMICAL RESEARCH METHODS-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
7.10
自引率
4.70%
发文量
820
审稿时长
2.5 months
期刊介绍: PLOS Computational Biology features works of exceptional significance that further our understanding of living systems at all scales—from molecules and cells, to patient populations and ecosystems—through the application of computational methods. Readers include life and computational scientists, who can take the important findings presented here to the next level of discovery. Research articles must be declared as belonging to a relevant section. More information about the sections can be found in the submission guidelines. Research articles should model aspects of biological systems, demonstrate both methodological and scientific novelty, and provide profound new biological insights. Generally, reliability and significance of biological discovery through computation should be validated and enriched by experimental studies. Inclusion of experimental validation is not required for publication, but should be referenced where possible. Inclusion of experimental validation of a modest biological discovery through computation does not render a manuscript suitable for PLOS Computational Biology. Research articles specifically designated as Methods papers should describe outstanding methods of exceptional importance that have been shown, or have the promise to provide new biological insights. The method must already be widely adopted, or have the promise of wide adoption by a broad community of users. Enhancements to existing published methods will only be considered if those enhancements bring exceptional new capabilities.
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