The Internal Structural Dynamics of Elastin-Like Polypeptide Assemblies by 13C-Direct Detected NMR Spectroscopy

IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Analytical Chemistry Pub Date : 2025-02-16 DOI:10.1021/acs.analchem.4c05163
Dörte Brandis, Pavel Kadeřávek, Dennis Kurzbach
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Abstract

Elastin-like polypeptides (ELPs) are biocompatible polymers exhibiting lower critical solution temperature (LCST) behavior, making them valuable in various applications, including drug delivery and tissue engineering. This study addresses the atomistic-level understanding of ELP self-assembly, focusing on their internal structural dynamics. Conventional proton-detected nuclear magnetic resonance (NMR) spectroscopy faces limitations in studying ELP aggregates due to accelerated proton exchange processes, which cause significant resonance broadening. Herein, we show how to overcome this hurdle by using carbon-13-detected NMR. This method mitigates issues related to amide proton exchange, allowing for a residue-resolved view of the internal configuration of ELP aggregates. With this method, we record residue-resolved 15N relaxation rates, revealing three features. (i) Proline residues within the PGXGV pentapeptide repeats (X being any amino acid except proline) of ELP become motional restricted upon aggregation, indicating their role as interchain contacts. (ii) Pentapeptides with alanine guest residue X display particularly significantly reduced motional freedom upon aggregation. (iii) Even within large ELP aggregates, fast internal dynamics characterize the peptide chains in a way that is reminiscent of condensed liquid phases. The presented study is the first proof of concept that 13C-direct detection is a viable tool to delineate the internal structural dynamics of condensed ELP phases by NMR. It might, thus, help to foster new investigations of their aggregation mechanisms.

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用13c -直接探测核磁共振光谱研究类弹性蛋白多肽组装体的内部结构动力学
弹性蛋白样多肽(ELPs)是一种生物相容性聚合物,具有较低的临界溶液温度(LCST)行为,使其在各种应用中具有价值,包括药物输送和组织工程。本研究从原子层面理解ELP自组装,重点关注其内部结构动力学。传统的质子探测核磁共振(NMR)波谱由于质子交换过程加速,导致显著的共振展宽,在研究ELP聚集体方面存在局限性。在这里,我们展示了如何通过使用碳13检测核磁共振来克服这一障碍。这种方法减轻了与酰胺质子交换相关的问题,允许对ELP聚集体的内部配置进行残留物解析。利用这种方法,我们记录了残差分辨15N弛豫速率,揭示了三个特征。(i) ELP PGXGV五肽重复序列(X为脯氨酸以外的任何氨基酸)内的脯氨酸残基在聚集时受到运动限制,表明它们具有链间接触的作用。(ii)具有丙氨酸客体残基X的五肽在聚集时表现出特别显著的运动自由度降低。(iii)即使在大的ELP聚集体中,快速的内部动力学也以一种让人想起凝聚液相的方式表征了肽链。该研究首次证明了13c直接检测是一种可行的工具,可以通过NMR来描述凝聚ELP相的内部结构动力学。因此,它可能有助于促进对其聚集机制的新调查。
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来源期刊
Analytical Chemistry
Analytical Chemistry 化学-分析化学
CiteScore
12.10
自引率
12.20%
发文量
1949
审稿时长
1.4 months
期刊介绍: Analytical Chemistry, a peer-reviewed research journal, focuses on disseminating new and original knowledge across all branches of analytical chemistry. Fundamental articles may explore general principles of chemical measurement science and need not directly address existing or potential analytical methodology. They can be entirely theoretical or report experimental results. Contributions may cover various phases of analytical operations, including sampling, bioanalysis, electrochemistry, mass spectrometry, microscale and nanoscale systems, environmental analysis, separations, spectroscopy, chemical reactions and selectivity, instrumentation, imaging, surface analysis, and data processing. Papers discussing known analytical methods should present a significant, original application of the method, a notable improvement, or results on an important analyte.
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