GOAT: A Global Optimization Algorithm for Molecules and Atomic Clusters

IF 16.9 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Angewandte Chemie International Edition Pub Date : 2025-02-17 DOI:10.1002/anie.202500393
Bernardo de Souza
{"title":"GOAT: A Global Optimization Algorithm for Molecules and Atomic Clusters","authors":"Bernardo de Souza","doi":"10.1002/anie.202500393","DOIUrl":null,"url":null,"abstract":"<p>In this work, we propose a new Global Optimization Algorithm (GOAT) for molecules and clusters of atoms and show how it can find the global energy minima for both systems without resorting to molecular dynamics (MD). This avoids the potential millions of time-consuming gradient calculations required by a long MD run. Because of that, it can be used with any regular quantum chemical method, even with the costlier hybrid DFT. We showcase its accuracy by running it on various systems, from organic molecules to water clusters, metal complexes, and metal nanoparticles, comparing it with state-of-the-art methods such as the Conformer-Rotamer Ensemble Sampling Tool (CREST). We also discuss its underlying theory and mechanisms for succeeding in challenging cases. GOAT is, in general, more efficient and accurate than previous algorithms in finding global minima and succeeds in cases where others cannot due to the free choice for the Potential Energy Surface (PES).</p>","PeriodicalId":125,"journal":{"name":"Angewandte Chemie International Edition","volume":"64 18","pages":""},"PeriodicalIF":16.9000,"publicationDate":"2025-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Angewandte Chemie International Edition","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/anie.202500393","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

In this work, we propose a new Global Optimization Algorithm (GOAT) for molecules and clusters of atoms and show how it can find the global energy minima for both systems without resorting to molecular dynamics (MD). This avoids the potential millions of time-consuming gradient calculations required by a long MD run. Because of that, it can be used with any regular quantum chemical method, even with the costlier hybrid DFT. We showcase its accuracy by running it on various systems, from organic molecules to water clusters, metal complexes, and metal nanoparticles, comparing it with state-of-the-art methods such as the Conformer-Rotamer Ensemble Sampling Tool (CREST). We also discuss its underlying theory and mechanisms for succeeding in challenging cases. GOAT is, in general, more efficient and accurate than previous algorithms in finding global minima and succeeds in cases where others cannot due to the free choice for the Potential Energy Surface (PES).

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
分子和原子簇的全局优化算法
在这项工作中,我们提出了一种新的分子和原子簇的全局优化算法(GOAT),并展示了它如何在不诉诸分子动力学(MD)的情况下找到这两个系统的全局能量最小值。这避免了长期MD运行所需的潜在的数百万次耗时的梯度计算。正因为如此,它可以与任何常规的量子化学方法一起使用,甚至与更昂贵的混合DFT一起使用。我们通过在各种系统(从有机分子到水团簇,金属配合物和金属纳米颗粒)上运行它来展示其准确性,并将其与最先进的方法(如保形-旋转体集合采样工具(CREST))进行比较。我们还讨论了其潜在的理论和机制,在具有挑战性的情况下取得成功。总的来说,GOAT在寻找全局最小值方面比以前的算法更有效和准确,并且在其他算法由于势能面(PES)的自由选择而无法实现的情况下取得了成功。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
26.60
自引率
6.60%
发文量
3549
审稿时长
1.5 months
期刊介绍: Angewandte Chemie, a journal of the German Chemical Society (GDCh), maintains a leading position among scholarly journals in general chemistry with an impressive Impact Factor of 16.6 (2022 Journal Citation Reports, Clarivate, 2023). Published weekly in a reader-friendly format, it features new articles almost every day. Established in 1887, Angewandte Chemie is a prominent chemistry journal, offering a dynamic blend of Review-type articles, Highlights, Communications, and Research Articles on a weekly basis, making it unique in the field.
期刊最新文献
Correction to “Magnetic and Peroxidase-Specific Single-Atom Nanozyme Through Cu-Doping Engineering for Ultrasensitive and Visual Tumor Diagnosis” Functional Polymer Synthesis From CO, CO2, and Butadiene Rational Construction and Modulation of Built-In Electric Field for High-Efficiency Alkali Metal-Based Batteries Microbial Electrosynthetic Biohybrid System to Synergistically Supply Electrons and CO2 to Rhodopseudomonas palustris for Lycopene Production Outside Back Cover: Dynamic Spin Governing Asymmetric Coordination Fields in Trimetallic Single-Atom Catalysts for Optimal Oxygen Reduction
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1