{"title":"Subject-Specific Dosage Estimation for Primary Hypothyroidism Using Sparse Data.","authors":"Devleena Ghosh, Chittaranjan Mandal","doi":"10.1089/cmb.2024.0752","DOIUrl":null,"url":null,"abstract":"<p><p>Subject-specific dosage estimation for primary hypothyroidism using subject-specific parameters of the thyrotropic regulation system is presented in this work. The data needed for such personalized modeling are usually sparse. This is addressed by utilizing available data along with domain knowledge for estimation of model parameters but with some uncertainty. Optimization-based dosage estimation approaches may not be applicable in the presence of such uncertainty. In this work, the optimal drug dosage range based on estimated parameter ranges for primary hypothyroid condition is estimated using the mathematical model through satisfiability modulo theory (SMT)-based analysis. The salient features of this work are as follows: (1) estimation of subject-specific model parameters with uncertainty using subject-specific pre-treatment and post-treatment observations, (2) modeling periodic drug administration as part of the ordinary differential equation model of thyrotropic regulation pathway through Fourier series approximation, (3) application of SMT-based analysis for determining optimal dosage range using this model and estimated parameter ranges, and (4) an initial dosage estimation method using the regression model. Results have been obtained to support the working of the developed computational procedures.</p>","PeriodicalId":15526,"journal":{"name":"Journal of Computational Biology","volume":" ","pages":""},"PeriodicalIF":1.4000,"publicationDate":"2025-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Computational Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1089/cmb.2024.0752","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Subject-specific dosage estimation for primary hypothyroidism using subject-specific parameters of the thyrotropic regulation system is presented in this work. The data needed for such personalized modeling are usually sparse. This is addressed by utilizing available data along with domain knowledge for estimation of model parameters but with some uncertainty. Optimization-based dosage estimation approaches may not be applicable in the presence of such uncertainty. In this work, the optimal drug dosage range based on estimated parameter ranges for primary hypothyroid condition is estimated using the mathematical model through satisfiability modulo theory (SMT)-based analysis. The salient features of this work are as follows: (1) estimation of subject-specific model parameters with uncertainty using subject-specific pre-treatment and post-treatment observations, (2) modeling periodic drug administration as part of the ordinary differential equation model of thyrotropic regulation pathway through Fourier series approximation, (3) application of SMT-based analysis for determining optimal dosage range using this model and estimated parameter ranges, and (4) an initial dosage estimation method using the regression model. Results have been obtained to support the working of the developed computational procedures.
期刊介绍:
Journal of Computational Biology is the leading peer-reviewed journal in computational biology and bioinformatics, publishing in-depth statistical, mathematical, and computational analysis of methods, as well as their practical impact. Available only online, this is an essential journal for scientists and students who want to keep abreast of developments in bioinformatics.
Journal of Computational Biology coverage includes:
-Genomics
-Mathematical modeling and simulation
-Distributed and parallel biological computing
-Designing biological databases
-Pattern matching and pattern detection
-Linking disparate databases and data
-New tools for computational biology
-Relational and object-oriented database technology for bioinformatics
-Biological expert system design and use
-Reasoning by analogy, hypothesis formation, and testing by machine
-Management of biological databases