{"title":"Mechanistic insights into axial ligation effects on electron transfer and selective C−H activation catalyzed by iron-oxo analogues","authors":"Yang Zeng , Xue Jiang , Yujun Si , Lijun Yang","doi":"10.1016/j.comptc.2025.115146","DOIUrl":null,"url":null,"abstract":"<div><div>Iron(IV)-oxo porphyrin (Cpd I) is the main catalytically active intermediate in the cytochrome P450 enzymatic cycle. During the C(sp<sup>3</sup>)-H bond activation, the Cpd I abstracts hydrogen atom from substrate, forming a transient Fe(III)-hydroxo (Cpd II) species and substrate radical. In this study, DFT reported the regioselectivity of C<img>H activation and the effect of axial ligand, using experimentally characterized hemes containing L = none, imidazole, SCH<sub>3</sub>, OCH<sub>3</sub>, Cl, and CN to simulate no axial ligand, His, Cys, Ser, and inorganic ligands for comparison. The results show that axial ligands can affect the spin density of complex and exhibit lower energy barrier for C2<img>H activation compared to C4<img>H in lidocaine. Ligands OCH<sub>3</sub> and SCH<sub>3</sub> demonstrate superior regioselectivity for C2<img>H activation. For Cpd II, the ligands CN, SCH<sub>3</sub> and OCH<sub>3</sub> are advantageous for C1<img>H abstraction. The findings enhance understanding of the ligand effect in Cpd I and provide novel insights into P450 enzyme catalytic mechanisms.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1247 ","pages":"Article 115146"},"PeriodicalIF":3.0000,"publicationDate":"2025-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computational and Theoretical Chemistry","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2210271X25000829","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Iron(IV)-oxo porphyrin (Cpd I) is the main catalytically active intermediate in the cytochrome P450 enzymatic cycle. During the C(sp3)-H bond activation, the Cpd I abstracts hydrogen atom from substrate, forming a transient Fe(III)-hydroxo (Cpd II) species and substrate radical. In this study, DFT reported the regioselectivity of CH activation and the effect of axial ligand, using experimentally characterized hemes containing L = none, imidazole, SCH3, OCH3, Cl, and CN to simulate no axial ligand, His, Cys, Ser, and inorganic ligands for comparison. The results show that axial ligands can affect the spin density of complex and exhibit lower energy barrier for C2H activation compared to C4H in lidocaine. Ligands OCH3 and SCH3 demonstrate superior regioselectivity for C2H activation. For Cpd II, the ligands CN, SCH3 and OCH3 are advantageous for C1H abstraction. The findings enhance understanding of the ligand effect in Cpd I and provide novel insights into P450 enzyme catalytic mechanisms.
期刊介绍:
Computational and Theoretical Chemistry publishes high quality, original reports of significance in computational and theoretical chemistry including those that deal with problems of structure, properties, energetics, weak interactions, reaction mechanisms, catalysis, and reaction rates involving atoms, molecules, clusters, surfaces, and bulk matter.