Structure-Guided design of Cas12a variants improves detection of nucleic acids

Cell insight Pub Date : 2025-04-01 Epub Date: 2025-01-20 DOI:10.1016/j.cellin.2025.100228
Xiaohan Tong , Tianle Li , Kun Zhang , Dongming Zhao , Ying Zhang , Hao Yin
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引用次数: 0

Abstract

CRISPR-Cas12a holds promising potential for pathogen detection. However, its performance is not optimal when combined with isothermal amplification. Hence, we engineered a mutant of LbCas12a (K595A) with reduced cis-cleavage activity, to minimize interference with isothermal amplification. Compared to wild-type Cas12a, the K595A mutant exhibited a 2–3 times faster reaction speed and a 1,000–10,000 times increase in sensitivity in a one-pot reaction. We applied this mutant for detection of African Swine Fever Virus (ASFV). This K595A mutant successfully detected all 30 ASFV samples within 20 minutes. Our study suggests a universal approach to improve the performance of Cas12a for pathogen detection.

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Cas12a变异体的结构导向设计提高了核酸的检测
CRISPR-Cas12a在病原体检测方面具有很大的潜力。然而,当与等温扩增相结合时,其性能并非最佳。因此,我们设计了一种LbCas12a (K595A)突变体,其顺式切割活性降低,以减少等温扩增的干扰。与野生型Cas12a相比,K595A突变体在一锅反应中反应速度快了2-3倍,灵敏度提高了1000 - 10000倍。我们将该突变体应用于非洲猪瘟病毒(ASFV)的检测。该K595A突变体在20分钟内成功检测出所有30份ASFV样本。我们的研究提出了一种通用的方法来提高Cas12a在病原体检测中的性能。
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来源期刊
Cell insight
Cell insight Neuroscience (General), Biochemistry, Genetics and Molecular Biology (General), Cancer Research, Cell Biology
CiteScore
2.70
自引率
0.00%
发文量
0
审稿时长
35 days
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