The landscape of cell regulatory and communication networks in the human dental follicle.

IF 4.8 3区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Frontiers in Bioengineering and Biotechnology Pub Date : 2025-02-05 eCollection Date: 2025-01-01 DOI:10.3389/fbioe.2025.1535245
Jia-Ning Liu, Jiong-Yi Tian, Lu Liu, Yuan Cao, Xiao Lei, Xiao-Hui Zhang, Zi-Qi Zhang, Jun-Xi He, Chen-Xi Zheng, Chao Ma, Sheng-Feng Bai, Bing-Dong Sui, Fang Jin, Ji Chen
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Abstract

Introduction: The dental follicle localizes the surrounding enamel organ and dental papilla of the developing tooth germ during the embryonic stage. It can differentiate and develop to form the periodontal ligament, cementum, and alveolar bone tissues. Postnatally, the dental follicle gradually degenerates, but some parts of the dental follicle remain around the impacted tooth. However, the specific cellular components and the intricate regulatory mechanisms governing the postnatal development and biological function of the dental follicle have not been completely understood.

Methods: We analyzed dental follicles with single-cell RNA sequencing (scRNA-seq) to reveal their cellular constitution molecular signatures by cell cycle analysis, scenic analysis, gene enrichment analysis, and cell communication analysis.

Results: Ten cell clusters were identified with differential characteristics, among which immune and vessel-related cells, as well as a stem cell population, were revealed as the main cell types. Gene regulatory networks (GRNs) were established and defined four regulon modules underlying dental tissue development and microenvironmental regulation, including vascular and immune responses. Cell-cell communication analysis unraveled crosstalk between vascular and immune cell components in orchestrating dental follicle biological activities, potentially based on COLLAGAN-CD44 ligand-receptor pairs, as well as ANGPTL1-ITGA/ITGB ligand-receptor pairs.

Conclusion: We establish a landscape of cell regulatory and communication networks in the human dental follicle, providing mechanistic insights into the cellular regulation and interactions in the complex dental follicle tissue microenvironment.

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人类牙滤泡中细胞调控和通讯网络的景观。
在胚胎阶段,牙毛囊定位于发育中的牙胚周围的牙釉质器官和牙乳头。它可以分化发展形成牙周韧带、牙骨质和牙槽骨组织。出生后,牙毛囊逐渐退化,但部分牙毛囊仍保留在阻生牙周围。然而,具体的细胞成分和复杂的调节机制控制出生后发育和牙滤泡的生物学功能尚未完全了解。方法:采用单细胞RNA测序(scRNA-seq)技术对牙毛囊进行细胞周期分析、景观分析、基因富集分析和细胞通讯分析,揭示牙毛囊的细胞结构分子特征。结果:鉴定出10个具有差异特征的细胞群,其中免疫细胞和血管相关细胞以及干细胞群为主要细胞类型。建立了基因调控网络(GRNs),并定义了四个调控模块,包括血管和免疫反应,影响牙组织发育和微环境调控。细胞-细胞通讯分析揭示了血管和免疫细胞组分在协调牙滤泡生物活性中的串音,可能基于COLLAGAN-CD44配体受体对,以及ANGPTL1-ITGA/ITGB配体受体对。结论:我们建立了人类牙滤泡中细胞调控和通讯网络的景观,为复杂牙滤泡组织微环境中的细胞调控和相互作用提供了机制见解。
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来源期刊
Frontiers in Bioengineering and Biotechnology
Frontiers in Bioengineering and Biotechnology Chemical Engineering-Bioengineering
CiteScore
8.30
自引率
5.30%
发文量
2270
审稿时长
12 weeks
期刊介绍: The translation of new discoveries in medicine to clinical routine has never been easy. During the second half of the last century, thanks to the progress in chemistry, biochemistry and pharmacology, we have seen the development and the application of a large number of drugs and devices aimed at the treatment of symptoms, blocking unwanted pathways and, in the case of infectious diseases, fighting the micro-organisms responsible. However, we are facing, today, a dramatic change in the therapeutic approach to pathologies and diseases. Indeed, the challenge of the present and the next decade is to fully restore the physiological status of the diseased organism and to completely regenerate tissue and organs when they are so seriously affected that treatments cannot be limited to the repression of symptoms or to the repair of damage. This is being made possible thanks to the major developments made in basic cell and molecular biology, including stem cell science, growth factor delivery, gene isolation and transfection, the advances in bioengineering and nanotechnology, including development of new biomaterials, biofabrication technologies and use of bioreactors, and the big improvements in diagnostic tools and imaging of cells, tissues and organs. In today`s world, an enhancement of communication between multidisciplinary experts, together with the promotion of joint projects and close collaborations among scientists, engineers, industry people, regulatory agencies and physicians are absolute requirements for the success of any attempt to develop and clinically apply a new biological therapy or an innovative device involving the collective use of biomaterials, cells and/or bioactive molecules. “Frontiers in Bioengineering and Biotechnology” aspires to be a forum for all people involved in the process by bridging the gap too often existing between a discovery in the basic sciences and its clinical application.
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