Synthesis, computational analysis, and exploring antiproliferative activity of triazolo- and thiazolo-pyrimidine derivatives as potential EGFR inhibitors

IF 4.7 2区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Molecular Structure Pub Date : 2025-06-25 Epub Date: 2025-02-18 DOI:10.1016/j.molstruc.2025.141789
Ali H. Abdelrahman , Mohammad E. Azab , Mohamed A. Hegazy , Ahmed Labena , Abdullah Y.A. Alzahrani , Sayed K. Ramadan
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Abstract

Anticancer drug acquiring usually discloses with an in vitro testing in cell panels to certainly detect the lead compounds. EGFR is a tyrosine kinase cell surface receptor that plays a key function in signal transduction processes and is observed on most cell surfaces. One of the promising frameworks in drug detection is pyrimidine and its fused heteroannulated bicyclic derivatives which exhibited promising anticancer activity. The prepared triazolopyrimidine and thiazolopyrimidine derivatives were proposed to fit into the ATP binding site of EGFR protein. The in vitro antiproliferative screening against MCF7 and HCT116 cancer cell panels disclosed the most influence of triazolopyrimidine 3, thiazolopyrimidine 9, and pyrimidinethione 1 compared to the reference drug, roscovitine (imidazopyrimidine hybrid). The inhibitory action of the most promising compounds was explored versus EGFR enzyme, which displayed the highest efficacy of triazolopyrimidine 3 compared to the standard drug (erlotinib). The structure-activity relationship (SAR) probe demonstrated that specific structural modifications had a significant impact on the antiproliferative action. In silico molecular docking was performed on these promising compounds versus EGFR enzyme (breast cancer protease, PDB ID: 3W32) to show the enzyme-inhibitor interactions, which uncovered the superlative binding interactions of triazolopyrimidine 3 with key nucleobases and amino acids of EGFR kinase. Among DFT calculations, ELUMO of compounds 3 < 1 < 9, which enriched its binding affinity of with nucleophilic receptor's active pockets. Regarding ADME simulation, they had gastrointestinal tract (GIT) absorption, good bioavailability score, and worthy lead-likeness. This work may contribute to developing new effective EGFR inhibitor.

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合成、计算分析和探索三唑和噻唑嘧啶衍生物作为潜在的EGFR抑制剂的抗增殖活性
抗癌药物的获取通常需要通过体外细胞组测试来确定先导化合物的含量。EGFR是一种酪氨酸激酶细胞表面受体,在信号转导过程中起关键作用,在大多数细胞表面都能观察到。嘧啶及其融合杂环双环衍生物具有良好的抗癌活性,是药物检测中很有前途的框架之一。制备的三唑嘧啶和噻唑嘧啶衍生物被认为适合EGFR蛋白的ATP结合位点。对MCF7和HCT116癌细胞组的体外抗增殖筛选显示,与参比药物roscovitine(咪唑嘧啶混合物)相比,三唑嘧啶3、噻唑嘧啶9和嘧啶硫酮1的影响最大。研究了最有希望的化合物对EGFR酶的抑制作用,与标准药物(厄洛替尼)相比,三唑嘧啶3的抑制作用最高。构效关系(SAR)探针表明,特定的结构修饰对抗增殖作用有显著影响。在硅分子对接中,这些有希望的化合物与EGFR酶(乳腺癌蛋白酶,PDB ID: 3W32)进行了分子对接,以显示酶-抑制剂的相互作用,揭示了三唑嘧啶3与EGFR激酶关键核碱基和氨基酸的最高结合作用。在DFT计算中,化合物3 <的ELUMO;1 & lt;9,增强了其与亲核受体活性口袋的结合亲和力。在ADME模拟方面,他们具有胃肠道(GIT)吸收,良好的生物利用度评分和值得信赖的铅相似度。这项工作可能有助于开发新的有效的EGFR抑制剂。
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来源期刊
Journal of Molecular Structure
Journal of Molecular Structure 化学-物理化学
CiteScore
7.10
自引率
15.80%
发文量
2384
审稿时长
45 days
期刊介绍: The Journal of Molecular Structure is dedicated to the publication of full-length articles and review papers, providing important new structural information on all types of chemical species including: • Stable and unstable molecules in all types of environments (vapour, molecular beam, liquid, solution, liquid crystal, solid state, matrix-isolated, surface-absorbed etc.) • Chemical intermediates • Molecules in excited states • Biological molecules • Polymers. The methods used may include any combination of spectroscopic and non-spectroscopic techniques, for example: • Infrared spectroscopy (mid, far, near) • Raman spectroscopy and non-linear Raman methods (CARS, etc.) • Electronic absorption spectroscopy • Optical rotatory dispersion and circular dichroism • Fluorescence and phosphorescence techniques • Electron spectroscopies (PES, XPS), EXAFS, etc. • Microwave spectroscopy • Electron diffraction • NMR and ESR spectroscopies • Mössbauer spectroscopy • X-ray crystallography • Charge Density Analyses • Computational Studies (supplementing experimental methods) We encourage publications combining theoretical and experimental approaches. The structural insights gained by the studies should be correlated with the properties, activity and/ or reactivity of the molecule under investigation and the relevance of this molecule and its implications should be discussed.
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