Self-supervised learning for graph-structured data in healthcare applications: A comprehensive review

IF 7 2区 医学 Q1 BIOLOGY Computers in biology and medicine Pub Date : 2025-02-24 DOI:10.1016/j.compbiomed.2025.109874
Safa Ben Atitallah , Chaima Ben Rabah , Maha Driss , Wadii Boulila , Anis Koubaa
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Abstract

The increasing complexity and interconnectedness of healthcare data present numerous opportunities to improve prediction, diagnosis, and treatment. Graph-structured data, which represents entities and their relationships, is well-suited for modeling these complex connections. However, effectively utilizing this data often requires strong and efficient learning algorithms, especially when dealing with limited labeled data. Self-supervised learning (SSL) has emerged as a powerful paradigm for leveraging unlabeled data to learn effective representations. This paper presents a comprehensive review of SSL approaches specifically designed for graph-structured data in healthcare applications. We explore the challenges and opportunities associated with healthcare data and assess the effectiveness of SSL techniques in real-world healthcare applications. Our discussion encompasses various healthcare settings, such as disease prediction, medical image analysis, and drug discovery. We critically evaluate the performance of different SSL methods across these tasks, highlighting their strengths, limitations, and potential future research directions. To the best of our knowledge, this is the first comprehensive review of SSL applied to graph data in healthcare, providing valuable guidance for researchers and practitioners looking to leverage these techniques to enhance outcomes and drive progress in the field.

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医疗数据的复杂性和相互关联性不断增加,为改进预测、诊断和治疗带来了许多机会。表示实体及其关系的图结构数据非常适合为这些复杂的联系建模。然而,有效利用这些数据往往需要强大而高效的学习算法,尤其是在处理有限的标记数据时。自我监督学习(SSL)已成为利用无标记数据学习有效表征的强大范例。本文全面回顾了专为医疗保健应用中的图结构数据而设计的 SSL 方法。我们探讨了与医疗保健数据相关的挑战和机遇,并评估了 SSL 技术在实际医疗保健应用中的有效性。我们的讨论涵盖了各种医疗环境,如疾病预测、医学图像分析和药物发现。我们严格评估了不同 SSL 方法在这些任务中的表现,强调了它们的优势、局限性和潜在的未来研究方向。据我们所知,这是第一篇全面评述将 SSL 应用于医疗保健领域图数据的文章,为希望利用这些技术提高成果和推动该领域进步的研究人员和从业人员提供了宝贵的指导。
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来源期刊
Computers in biology and medicine
Computers in biology and medicine 工程技术-工程:生物医学
CiteScore
11.70
自引率
10.40%
发文量
1086
审稿时长
74 days
期刊介绍: Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.
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