Distinct roles of Constitutive Photomorphogenesis Protein 1 homolog (COP1) in human hepatocyte models.

IF 3.9 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Frontiers in Molecular Biosciences Pub Date : 2025-02-07 eCollection Date: 2025-01-01 DOI:10.3389/fmolb.2025.1548582
Sébastien Soubeyrand, Paulina Lau, Ruth McPherson
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Abstract

Introduction: Constitutive Photomorphogenesis Protein 1 homolog (COP1) is a conserved E3 ligase with key roles in several biological systems. Prior work in hepatocyte-derived tumors categorized COP1 as an oncogene, but its role in untransformed hepatocytes remains largely unexplored. Here, we have investigated the role of COP1 in primary human hepatocytes and two transformed hepatocyte models, HepG2 and HuH-7 cells.

Methods: The role of COP1 was tested by silencing and transduction experiments in HepG2, HuH-7, and primary human hepatocytes. Transcription array data of COP1-suppressed cells were generated and analyzed using clustering analyses. Cellular impacts were examined by proliferation assays, qRT-PCR, western blotting, reporter assays, and APOB enzyme-linked immunosorbent assays.

Results and discussion: COP1 suppression had no noticeable impact on HepG2 and HuH-7 proliferation and was associated with contrasting rather than congruent transcriptome changes. Transcriptomic changes were consistent with perturbed metabolism in primary hepatocytes and HepG2 cells and impaired cell cycle regulation in HuH-7 cells. In HepG2 and primary hepatocytes but not in HuH-7 cells, COP1 suppression reduced the expression of important hepatic regulators and markers. COP1 downregulation reduced hepatic nuclear factor-4 alpha (HNF4A) abundance and function, as assessed by a lower abundance of key HNF4A targets, reduced APOB secretion, and reporter assays. HNF4A function could be restored by introducing a siRNA-resistant COP1 transgene, whereas HNF4A restoration partially rescued COP1 silencing in HepG2 cells. Our results identify and detail a pivotal regulatory role of COP1 in hepatocytes, in part through HNF4A.

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组成型光形态发生蛋白1同源物(COP1)在人肝细胞模型中的独特作用。
组成型光形态发生蛋白1同源物(COP1)是一种保守的E3连接酶,在多种生物系统中起关键作用。先前对肝细胞源性肿瘤的研究将COP1归类为癌基因,但其在未转化肝细胞中的作用仍未被广泛探索。在这里,我们研究了COP1在原代人肝细胞和两种转化肝细胞模型HepG2和HuH-7细胞中的作用。方法:通过HepG2、HuH-7和人原代肝细胞的沉默和转导实验,检测COP1的作用。生成cop1抑制细胞的转录阵列数据,并使用聚类分析进行分析。通过增殖试验、qRT-PCR、western blotting、报告细胞试验和APOB酶联免疫吸附试验检测细胞影响。结果和讨论:COP1抑制对HepG2和HuH-7的增殖无明显影响,与对照而非一致转录组变化有关。转录组学变化与原代肝细胞和HepG2细胞的代谢紊乱以及HuH-7细胞的细胞周期调节受损一致。在HepG2和原代肝细胞中,而在HuH-7细胞中,COP1抑制降低了重要的肝脏调节因子和标记物的表达。通过降低关键HNF4A靶点的丰度、APOB分泌减少和报告基因检测来评估,COP1下调降低了肝核因子-4 α (HNF4A)的丰度和功能。通过引入抗sirna的COP1转基因可以恢复HNF4A的功能,而HNF4A的恢复部分地恢复了HepG2细胞中COP1的沉默。我们的研究结果确定并详细说明了COP1在肝细胞中的关键调节作用,部分通过HNF4A。
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来源期刊
Frontiers in Molecular Biosciences
Frontiers in Molecular Biosciences Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
7.20
自引率
4.00%
发文量
1361
审稿时长
14 weeks
期刊介绍: Much of contemporary investigation in the life sciences is devoted to the molecular-scale understanding of the relationships between genes and the environment — in particular, dynamic alterations in the levels, modifications, and interactions of cellular effectors, including proteins. Frontiers in Molecular Biosciences offers an international publication platform for basic as well as applied research; we encourage contributions spanning both established and emerging areas of biology. To this end, the journal draws from empirical disciplines such as structural biology, enzymology, biochemistry, and biophysics, capitalizing as well on the technological advancements that have enabled metabolomics and proteomics measurements in massively parallel throughput, and the development of robust and innovative computational biology strategies. We also recognize influences from medicine and technology, welcoming studies in molecular genetics, molecular diagnostics and therapeutics, and nanotechnology. Our ultimate objective is the comprehensive illustration of the molecular mechanisms regulating proteins, nucleic acids, carbohydrates, lipids, and small metabolites in organisms across all branches of life. In addition to interesting new findings, techniques, and applications, Frontiers in Molecular Biosciences will consider new testable hypotheses to inspire different perspectives and stimulate scientific dialogue. The integration of in silico, in vitro, and in vivo approaches will benefit endeavors across all domains of the life sciences.
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