{"title":"An in-depth study of the dynamics of Thornley’s mathematical model in plant biology with a view to an improved model","authors":"Ati Rostami , Brodie A.J. Lawson , Kevin Burrage","doi":"10.1016/j.jtbi.2025.112071","DOIUrl":null,"url":null,"abstract":"<div><div>Plants are essential for life on Earth, serving as a major source of food supply and contributing to the planet’s carbon balance. Mathematical modelling is an important mechanism for predicting and optimising plant growth in agriculture, and Thornley’s mathematical model (Thornley, 1997) is one of the most widely used models describing carbon and nitrogen allocation in plants. However, a formal mathematical analysis of the model’s behaviour has not been performed. Our analysis of the model provides new insights into how and why the model can be inappropriate. By varying the values of some model parameters, we identify non-physical and even quite chaotic behaviour. In response, we modify Thornley’s model by including additional litter terms, resulting in the elimination of these non-physical behaviours.</div></div>","PeriodicalId":54763,"journal":{"name":"Journal of Theoretical Biology","volume":"604 ","pages":"Article 112071"},"PeriodicalIF":2.0000,"publicationDate":"2025-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Theoretical Biology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022519325000372","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/3/5 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Plants are essential for life on Earth, serving as a major source of food supply and contributing to the planet’s carbon balance. Mathematical modelling is an important mechanism for predicting and optimising plant growth in agriculture, and Thornley’s mathematical model (Thornley, 1997) is one of the most widely used models describing carbon and nitrogen allocation in plants. However, a formal mathematical analysis of the model’s behaviour has not been performed. Our analysis of the model provides new insights into how and why the model can be inappropriate. By varying the values of some model parameters, we identify non-physical and even quite chaotic behaviour. In response, we modify Thornley’s model by including additional litter terms, resulting in the elimination of these non-physical behaviours.
期刊介绍：
The Journal of Theoretical Biology is the leading forum for theoretical perspectives that give insight into biological processes. It covers a very wide range of topics and is of interest to biologists in many areas of research, including:
• Brain and Neuroscience
• Cancer Growth and Treatment
• Cell Biology
• Developmental Biology
• Ecology
• Evolution
• Immunology,
• Infectious and non-infectious Diseases,
• Mathematical, Computational, Biophysical and Statistical Modeling
• Microbiology, Molecular Biology, and Biochemistry
• Networks and Complex Systems
• Physiology
• Pharmacodynamics
• Animal Behavior and Game Theory
Acceptable papers are those that bear significant importance on the biology per se being presented, and not on the mathematical analysis. Papers that include some data or experimental material bearing on theory will be considered, including those that contain comparative study, statistical data analysis, mathematical proof, computer simulations, experiments, field observations, or even philosophical arguments, which are all methods to support or reject theoretical ideas. However, there should be a concerted effort to make papers intelligible to biologists in the chosen field.
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