Bioprospecting Antarctic Microorganisms: Investigating Hymenobacter psoromatis PAMC26554 for Biochemical Potential.

IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Journal of microbiology and biotechnology Pub Date : 2025-03-13 DOI:10.4014/jmb.2412.12010
Hirotake Yamaguchi, Ryoichi Yamada, Jun Hyuck Lee, Tae-Jin Oh
{"title":"Bioprospecting Antarctic Microorganisms: Investigating <i>Hymenobacter psoromatis</i> PAMC26554 for Biochemical Potential.","authors":"Hirotake Yamaguchi, Ryoichi Yamada, Jun Hyuck Lee, Tae-Jin Oh","doi":"10.4014/jmb.2412.12010","DOIUrl":null,"url":null,"abstract":"<p><p>Microorganisms from the genus <i>Hymenobacter</i> are known for their distinctive traits, yet their secondary metabolite (SM) production has not been thoroughly investigated. In this study, we examined the biosynthetic potential of SMs from <i>Hymenobacter psoromatis</i> PAMC26554, which was isolated from Antarctic lichen. In silico analysis identified biosynthetic gene clusters (BGCs) for terpenes, non-ribosomal peptide synthetases (NRPSs), and polyketide synthases (PKSs), indicating the strain's potential for novel SM production. Optimization of culture conditions showed that R2A medium at 15°C supported growth. HPLC analysis revealed phenylacetic acid (PAA) as a notable compound, which was characterized by ESI-MS and NMR, marking the first isolation of PAA from the genus <i>Hymenobacter</i>. In addition, bioactivity assays indicated moderate lipase inhibition by PAA, while molecular docking studies revealed stable interactions with the enzyme, demonstrating that hydrogen bonding and π-π stacking contribute to its lipase inhibitory activity. In summary, this research highlights the genus <i>Hymenobacter</i> as a potential source for secondary metabolite discovery, with PAA exemplifying its unexplored biochemical capabilities.</p>","PeriodicalId":16481,"journal":{"name":"Journal of microbiology and biotechnology","volume":"35 ","pages":"e2412010"},"PeriodicalIF":3.1000,"publicationDate":"2025-03-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11925752/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of microbiology and biotechnology","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.4014/jmb.2412.12010","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Microorganisms from the genus Hymenobacter are known for their distinctive traits, yet their secondary metabolite (SM) production has not been thoroughly investigated. In this study, we examined the biosynthetic potential of SMs from Hymenobacter psoromatis PAMC26554, which was isolated from Antarctic lichen. In silico analysis identified biosynthetic gene clusters (BGCs) for terpenes, non-ribosomal peptide synthetases (NRPSs), and polyketide synthases (PKSs), indicating the strain's potential for novel SM production. Optimization of culture conditions showed that R2A medium at 15°C supported growth. HPLC analysis revealed phenylacetic acid (PAA) as a notable compound, which was characterized by ESI-MS and NMR, marking the first isolation of PAA from the genus Hymenobacter. In addition, bioactivity assays indicated moderate lipase inhibition by PAA, while molecular docking studies revealed stable interactions with the enzyme, demonstrating that hydrogen bonding and π-π stacking contribute to its lipase inhibitory activity. In summary, this research highlights the genus Hymenobacter as a potential source for secondary metabolite discovery, with PAA exemplifying its unexplored biochemical capabilities.

Abstract Image

Abstract Image

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
南极微生物生物勘探:研究psoromatis膜杆菌PAMC26554的生化潜力。
膜杆菌属微生物以其独特的特性而闻名,但其次生代谢物(SM)的产生尚未得到彻底的研究。本研究研究了从南极地衣中分离得到的补soromatis膜杆菌PAMC26554的生物合成潜力。硅分析鉴定出萜类、非核糖体肽合成酶(NRPSs)和聚酮合成酶(pks)的生物合成基因簇(BGCs),表明该菌株具有生产新型SM的潜力。培养条件优化表明,R2A培养基在15℃条件下支持生长。高效液相色谱分析表明,苯乙酸(PAA)为主要化合物,经ESI-MS和NMR鉴定,首次从膜杆菌属中分离到PAA。此外,生物活性分析表明PAA对脂肪酶有适度的抑制作用,而分子对接研究显示PAA与酶的稳定相互作用,表明氢键和π-π堆叠有助于其抑制脂肪酶的活性。总之,本研究强调了膜杆菌属作为次级代谢物发现的潜在来源,PAA举例说明了其未开发的生化能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Journal of microbiology and biotechnology
Journal of microbiology and biotechnology BIOTECHNOLOGY & APPLIED MICROBIOLOGY-MICROBIOLOGY
CiteScore
5.50
自引率
3.60%
发文量
151
审稿时长
2 months
期刊介绍: The Journal of Microbiology and Biotechnology (JMB) is a monthly international journal devoted to the advancement and dissemination of scientific knowledge pertaining to microbiology, biotechnology, and related academic disciplines. It covers various scientific and technological aspects of Molecular and Cellular Microbiology, Environmental Microbiology and Biotechnology, Food Biotechnology, and Biotechnology and Bioengineering (subcategories are listed below). Launched in March 1991, the JMB is published by the Korean Society for Microbiology and Biotechnology (KMB) and distributed worldwide.
期刊最新文献
Skin Barrier-Improving and Anti-Inflammatory Effects of Exosomes Derived from the Fructobacillus fructosus NSH-1 Strain Isolated from the Campsis grandiflora Flower. Probiotic Lactiplantibacillus plantarum WB4404 and WB4503 from Kimchi Induce Apoptosis in Human Colorectal Cancer Cells In Vitro. Plumbagin Disrupts Biofilm Integrity and Resistance Gene Expression in Carbapenem-Resistant Acinetobacter baumannii. Functional Dipeptide Production by Immobilized Enzyme on Yeast Cell Surface. Black Currant Extract Protects against Oxidative Stress in SH-SY5Y Cells and High-Fat Diet-Induced Cognitive Impairment in C57BL/6 Mice.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1