Dysregulated biosynthesis and hydrolysis of cyclic-di-adenosine monophosphate impedes sporulation and butanol and acetone production in Clostridium beijerinckii NCIMB 8052.

IF 4.8 3区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Frontiers in Bioengineering and Biotechnology Pub Date : 2025-02-28 eCollection Date: 2025-01-01 DOI:10.3389/fbioe.2025.1547226
Marian M Awaga-Cromwell, Santosh Kumar, Hieu M Truong, Eric Agyeman-Duah, Christopher C Okonkwo, Victor C Ujor
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Abstract

Introduction: Although solventogenic Clostridium species (SCS) produce butanol, achieving high enough titers to warrant commercialization of biobutanol remains elusive. Thus, deepening our understanding of the intricate cellular wiring of SCS is crucial to unearthing new targets and strategies for engineering novel strains capable of producing and tolerating greater concentrations of butanol.

Methods: This study investigated the potential role of cyclic-di-adenosine monophosphate (c-di-AMP) in regulating solvent biosynthesis in C. beijerinckii NCIMB 8052. Genes for c-di-AMP-producing and degrading enzymes [DNA integrity scanning protein A (disA) and phosphodiesterase (pde), respectively] were cloned in this organism and the recombinant strains were characterized relative to the control strain.

Results: Plasmid-borne expression of disA in C. beijerinckii led to a 1.83-fold increase in c-di-AMP levels and near complete (∼100%) inhibition of butanol and acetone biosynthesis. Conversely, c-di-AMP concentrations in the pde-expressing strain reduced 7.54-fold relative to the control with 4.20- and 2.3-fold reductions in butanol and acetone concentrations, respectively, when compared to the control strain. Relative to the control and the pde-expressing strains, the disA-expressing strain produced 1.50- and 1.90-fold more ethanol, respectively. Enzyme activity assays show that core solvent biosynthesis enzymes are mostly inhibited in vitro by exogenously supplemented c-di-AMP (50 nM). Both recombinant strains of C. beijerinckii are impaired for sporulation, particularly the disA-expressing strain.

Discussion: Collectively, the results show that dysregulated production and hydrolysis of c-di-AMP severely impair butanol and acetone biosynthesis in C. beijerinckii, suggesting broader roles of this second messenger in the regulation of solventogenesis and likely, sporulation in this organism.

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贝氏梭菌NCIMB 8052的生物合成和水解失调阻碍了孢子形成和丁醇和丙酮的产生。
虽然溶剂性梭状芽胞杆菌(SCS)产生丁醇,但达到足够高的滴度以保证生物丁醇的商业化仍然是难以捉摸的。因此,加深我们对SCS错综复杂的细胞连接的理解对于发掘新的靶点和策略来设计能够产生和耐受更高浓度丁醇的新菌株至关重要。方法:研究环二磷酸腺苷(c-di-AMP)对北jerinckii NCIMB 8052溶剂生物合成的调节作用。在该菌中克隆了c-二磷酸腺苷产生酶和降解酶基因[DNA完整性扫描蛋白A (disA)和磷酸二酯酶(pde)],并对重组菌株进行了相对于对照菌株的特征分析。结果:disA在beijerinckii中的质粒表达导致c-di-AMP水平增加1.83倍,并几乎完全(~ 100%)抑制丁醇和丙酮的生物合成。相反,与对照菌株相比,表达pde的菌株中c-二磷酸腺苷的浓度降低了7.54倍,丁醇和丙酮的浓度分别降低了4.20倍和2.3倍。与对照和表达pde的菌株相比,不表达pde的菌株分别产生1.50倍和1.90倍的乙醇。酶活性测定表明,外源添加50 nM的c-二磷酸腺苷(c-di-AMP)对核心溶剂生物合成酶的体外抑制作用最大。两种重组菌株的产孢能力均受到损害,尤其是不表达a的菌株。综上所述,研究结果表明c-二- amp的产生和水解失调严重损害了C. beijerinckii的丁醇和丙酮的生物合成,表明这种第二信使在调节该生物的溶剂形成和可能的孢子形成中具有更广泛的作用。
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来源期刊
Frontiers in Bioengineering and Biotechnology
Frontiers in Bioengineering and Biotechnology Chemical Engineering-Bioengineering
CiteScore
8.30
自引率
5.30%
发文量
2270
审稿时长
12 weeks
期刊介绍: The translation of new discoveries in medicine to clinical routine has never been easy. During the second half of the last century, thanks to the progress in chemistry, biochemistry and pharmacology, we have seen the development and the application of a large number of drugs and devices aimed at the treatment of symptoms, blocking unwanted pathways and, in the case of infectious diseases, fighting the micro-organisms responsible. However, we are facing, today, a dramatic change in the therapeutic approach to pathologies and diseases. Indeed, the challenge of the present and the next decade is to fully restore the physiological status of the diseased organism and to completely regenerate tissue and organs when they are so seriously affected that treatments cannot be limited to the repression of symptoms or to the repair of damage. This is being made possible thanks to the major developments made in basic cell and molecular biology, including stem cell science, growth factor delivery, gene isolation and transfection, the advances in bioengineering and nanotechnology, including development of new biomaterials, biofabrication technologies and use of bioreactors, and the big improvements in diagnostic tools and imaging of cells, tissues and organs. In today`s world, an enhancement of communication between multidisciplinary experts, together with the promotion of joint projects and close collaborations among scientists, engineers, industry people, regulatory agencies and physicians are absolute requirements for the success of any attempt to develop and clinically apply a new biological therapy or an innovative device involving the collective use of biomaterials, cells and/or bioactive molecules. “Frontiers in Bioengineering and Biotechnology” aspires to be a forum for all people involved in the process by bridging the gap too often existing between a discovery in the basic sciences and its clinical application.
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