Genome sequencing highlights the fungal sclerotium formation of medicinal fungi Polyporus umbellatus.

IF 2.5 Q3 GENETICS & HEREDITY BMC genomic data Pub Date : 2025-03-17 DOI:10.1186/s12863-025-01311-8
Li Chi, Tianrui Liu, Zhongyi Hua, Pengjie Han, Honghong Jiao, Yuan Yuan
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Abstract

Objectives: Polyporus umbellatus is a well-known medicinal fungus in Asia. Due to its long growth cycle, wild resources of P. umbellatus are rapidly declining. Research on P. umbellatus growth is scarce, thereby impeding the investigation into the mechanism of sclerotium formation. In this study, the whole genome sequence of P. umbellatus was assembled and annotated.

Data description: The generated genome was 79.74 Mb with an N50 of 969.73 Kbp, a GC content of 50.63%, encoding 10,864 protein-coding genes. Additionally, 82 ribosomal RNAs, 488 transfer RNAs, 25 small nuclear RNAs (snRNAs) and 741 micro RNA (miRNAs) were identified. This genomic resource will unveil molecular mechanisms of sclerotium formation and provides insight into the underlying molecular processes in medicinal fungi.

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基因组测序突出了药用真菌伞孢菌菌核的形成。
目的:伞形蓼是亚洲著名的药用真菌。由于其生长周期长,其野生资源正在迅速减少。对伞藻生长的研究较少,从而阻碍了对伞藻菌核形成机制的研究。在本研究中,我们组装了伞形假蝇的全基因组序列并进行了注释。数据描述:生成的基因组全长79.74 Mb, N50为969.73 Kbp, GC含量为50.63%,编码10,864个蛋白编码基因。此外,还鉴定出82种核糖体RNA、488种转移RNA、25种小核RNA (snrna)和741种微RNA (miRNAs)。这一基因组资源将揭示菌核形成的分子机制,并为药用真菌的潜在分子过程提供见解。
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