Transcriptomic analysis of maize leaves under different irrigation treatments in field conditions.

IF 2.5 Q3 GENETICS & HEREDITY BMC genomic data Pub Date : 2025-03-19 DOI:10.1186/s12863-025-01302-9
Yuan-Xin Li, Ru-Zhi Li, Jing Yang, Zhi-Wei Wang, Xiao-Guang Li, Hou-Zhen Yi, Xin-Ping Guo, Hang Zhou, Kai-Hua Jia, Peng-Fei Chu
{"title":"Transcriptomic analysis of maize leaves under different irrigation treatments in field conditions.","authors":"Yuan-Xin Li, Ru-Zhi Li, Jing Yang, Zhi-Wei Wang, Xiao-Guang Li, Hou-Zhen Yi, Xin-Ping Guo, Hang Zhou, Kai-Hua Jia, Peng-Fei Chu","doi":"10.1186/s12863-025-01302-9","DOIUrl":null,"url":null,"abstract":"<p><strong>Objectives: </strong>As one of the most widely cultivated agricultural crops in the world, maize (Zea mays L.) yield is often affected by water stress. In this study, we designed eight different irrigation levels in a field environment, covering a wide range of gradients, and conducted a comprehensive transcriptomic analysis of maize leaves under these eight treatments. The results revealed the molecular mechanisms by which maize responds to drought, optimal irrigation, and excessive irrigation in field conditions. This not only deepens our understanding of maize's response to water stress but also provides valuable genetic resources and theoretical insights for future genetic improvement.</p><p><strong>Data description: </strong>This study designed eight different irrigation levels under field conditions and conducted comprehensive transcriptome sequencing of maize ear leaf tissues. Analysis of the transcriptome data identified differentially expressed genes (DEGs), and principal component analysis (PCA) revealed a clear separation trend among samples under varying water conditions. Furthermore, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses highlighted functional categories associated with water response, cellular metabolism, and growth regulation. These findings provide valuable insights into the molecular mechanisms of maize under drought, optimal irrigation, and over-irrigation conditions, laying a foundation for future genetic improvement efforts.</p>","PeriodicalId":72427,"journal":{"name":"BMC genomic data","volume":"26 1","pages":"19"},"PeriodicalIF":2.5000,"publicationDate":"2025-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11921481/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"BMC genomic data","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1186/s12863-025-01302-9","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Objectives: As one of the most widely cultivated agricultural crops in the world, maize (Zea mays L.) yield is often affected by water stress. In this study, we designed eight different irrigation levels in a field environment, covering a wide range of gradients, and conducted a comprehensive transcriptomic analysis of maize leaves under these eight treatments. The results revealed the molecular mechanisms by which maize responds to drought, optimal irrigation, and excessive irrigation in field conditions. This not only deepens our understanding of maize's response to water stress but also provides valuable genetic resources and theoretical insights for future genetic improvement.

Data description: This study designed eight different irrigation levels under field conditions and conducted comprehensive transcriptome sequencing of maize ear leaf tissues. Analysis of the transcriptome data identified differentially expressed genes (DEGs), and principal component analysis (PCA) revealed a clear separation trend among samples under varying water conditions. Furthermore, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses highlighted functional categories associated with water response, cellular metabolism, and growth regulation. These findings provide valuable insights into the molecular mechanisms of maize under drought, optimal irrigation, and over-irrigation conditions, laying a foundation for future genetic improvement efforts.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
田间不同灌溉条件下玉米叶片转录组学分析。
目的:作为世界上种植最广泛的农作物之一,玉米(Zea mays L.)的产量经常受到水分胁迫的影响。在本研究中,我们在田间环境中设计了八种不同的灌溉水平,涵盖了广泛的梯度范围,并对这八种处理下的玉米叶片进行了全面的转录组分析。结果揭示了玉米在田间条件下应对干旱、最佳灌溉和过度灌溉的分子机制。这不仅加深了我们对玉米对水胁迫响应的理解,也为未来的遗传改良提供了宝贵的遗传资源和理论启示:本研究设计了田间条件下 8 种不同的灌溉水平,并对玉米穗叶组织进行了全面的转录组测序。对转录组数据的分析确定了差异表达基因(DEGs),主成分分析(PCA)揭示了不同水分条件下样本间明显的分离趋势。此外,基因本体(GO)和京都基因和基因组百科全书(KEGG)通路富集分析突出了与水响应、细胞代谢和生长调节相关的功能类别。这些发现为了解玉米在干旱、最佳灌溉和过度灌溉条件下的分子机制提供了宝贵的见解,为今后的遗传改良工作奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
4.90
自引率
0.00%
发文量
0
期刊最新文献
Whole genome sequence of Staphylococcus aureus strain 37 M isolated from cows with subclinical mastitis in Uganda. Unveiling complete genome sequence of Streptomyces griseoincarnatus AR2 from Katpana cold desert: the roof of the world surrounded by Karakoram mountain range. Draft genome sequence of the medicinal fungus Rigidoporus glomeratus isolated from Gaoligong mountain. Draft genome sequence of a chromium-resistant Bacillus altitudinis AK25 strain isolated from contaminated aquatic environment. Transcriptome profiling across 6 different tissues in Vigna radiata var. sublobata.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1