Structure Search with the Strategic Escape Algorithm.

IF 5.5 1区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Chemical Theory and Computation Pub Date : 2025-04-08 Epub Date: 2025-03-21 DOI:10.1021/acs.jctc.4c01746
Jordan Burkhardt, Yinglu Jia, Wan-Lu Li
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Abstract

This work introduces the Strategic Escape (SE) algorithm, an approach that systematically ensures effective exploration of the potential energy surface during global minimum searches for atomic clusters. The SE algorithm prioritizes the escape from local minima prior to geometry optimization, leveraging a combination of randomized direction vectors, distance-based uniqueness criteria, and covalent bonding heuristics. These principles enhance structural diversity and computational efficiency by reducing redundant geometry optimizations. Additionally, a symmetry-guided seed generation method based on an adaptive polygon is proposed to provide diverse and physically realistic initial configurations. Together, these methods achieve a 2.3-fold improvement in computational efficiency compared to conventional Basin-Hopping approaches. The effectiveness of the SE algorithm is demonstrated through its application to boron, metal clusters, and binary-composition clusters, achieving rapid convergence to global minimum structures with high reliability. These advancements establish the SE algorithm as a robust and scalable tool for exploring complex chemical systems.

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基于策略逃逸算法的结构搜索。
这项工作介绍了策略逃逸(SE)算法,该算法系统地确保在原子簇的全局最小搜索过程中有效地探索势能面。SE算法利用随机方向向量、基于距离的唯一性标准和共价键启发式的组合,优先考虑从局部最小值的逃脱,而不是几何优化。这些原理通过减少冗余的几何优化来增强结构多样性和计算效率。此外,提出了一种基于自适应多边形的对称引导种子生成方法,以提供多样化和物理逼真的初始配置。与传统的盆地跳跃方法相比,这些方法的计算效率提高了2.3倍。通过对硼簇、金属簇和二元组成簇的应用,证明了SE算法的有效性,实现了快速收敛到全局最小结构,可靠性高。这些进步使SE算法成为探索复杂化学系统的强大且可扩展的工具。
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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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