A generalized adder for cell size homeostasis: Effects on stochastic clonal proliferation.

IF 3.1 3区 生物学 Q2 BIOPHYSICS Biophysical journal Pub Date : 2025-05-06 Epub Date: 2025-03-20 DOI:10.1016/j.bpj.2025.03.011
César Nieto, César Augusto Vargas-García, Abhyudai Singh
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Abstract

Measurements of cell size dynamics have revealed phenomenological principles by which individual cells control their size across diverse organisms. One of the emerging paradigms of cell size homeostasis is the adder, where the cell cycle duration is established such that the cell size increase from birth to division is independent of the newborn cell size. We provide a mechanistic formulation of the adder, considering that cell size follows any arbitrary nonexponential growth law. Our results show that the main requirement to obtain an adder regardless of the growth law (the time derivative of cell size) is that cell cycle regulators are produced at a rate proportional to the growth law, and cell division is triggered when these molecules reach a prescribed threshold level. Among the implications of this generalized adder, we investigate fluctuations in the proliferation of single-cell-derived colonies. Considering exponential cell size growth, random fluctuations in clonal size show a transient increase and then eventually decay to zero over time (i.e., clonal populations become asymptotically more similar). In contrast, several forms of nonexponential cell size dynamics (with adder-based cell size control) yield qualitatively different results: clonal size fluctuations monotonically increase over time, reaching a nonzero value. These results characterize the interplay between cell size homeostasis at the single-cell level and clonal proliferation at the population level, explaining the broad fluctuations in clonal sizes seen in barcoded human cell lines.

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细胞大小稳态的广义加法器:对随机克隆增殖的影响。
细胞大小动力学的测量揭示了单个细胞在不同生物体中控制其大小的现象学原理。细胞大小动态平衡的一个新范例是加法器,其中细胞周期持续时间的建立使得细胞大小从出生到分裂的增加与新生细胞大小无关。考虑到细胞大小遵循任意非指数增长规律,我们提供了加法器的机制公式。我们的结果表明,无论生长规律(细胞大小的时间导数)如何,获得加法器的主要要求是细胞周期调节因子以与生长规律成比例的速率产生,当这些分子达到规定的阈值水平时触发细胞分裂。在这个广义加法器的含义中,我们研究了单细胞衍生菌落增殖的波动。考虑到细胞大小的指数增长,克隆大小的随机波动显示出短暂的增加,然后随着时间的推移最终衰减到零(即,克隆群体变得越来越相似)。相比之下,几种形式的非指数细胞大小动态(具有基于加法器的细胞大小控制)产生定性不同的结果:克隆大小波动随时间单调增加,达到非零值。这些结果表征了单细胞水平的细胞大小稳态与群体水平的克隆增殖之间的相互作用,解释了条形码人类细胞系中克隆大小的广泛波动。
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来源期刊
Biophysical journal
Biophysical journal 生物-生物物理
CiteScore
6.10
自引率
5.90%
发文量
3090
审稿时长
2 months
期刊介绍: BJ publishes original articles, letters, and perspectives on important problems in modern biophysics. The papers should be written so as to be of interest to a broad community of biophysicists. BJ welcomes experimental studies that employ quantitative physical approaches for the study of biological systems, including or spanning scales from molecule to whole organism. Experimental studies of a purely descriptive or phenomenological nature, with no theoretical or mechanistic underpinning, are not appropriate for publication in BJ. Theoretical studies should offer new insights into the understanding ofexperimental results or suggest new experimentally testable hypotheses. Articles reporting significant methodological or technological advances, which have potential to open new areas of biophysical investigation, are also suitable for publication in BJ. Papers describing improvements in accuracy or speed of existing methods or extra detail within methods described previously are not suitable for BJ.
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