SWEET Family Transporters Act as Water-Conducting Carrier Proteins in Plants.

IF 5.3 2区 化学 Q1 CHEMISTRY, MEDICINAL Journal of Chemical Information and Modeling Pub Date : 2025-04-14 Epub Date: 2025-03-29 DOI:10.1021/acs.jcim.5c00110
Balaji Selvam, Arnav Paul, Ya-Chi Yu, Li-Qing Chen, Diwakar Shukla
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Abstract

Dedicated water channels are involved in the facilitated diffusion of water molecules across cell membranes in plants. Transporter proteins are also known to transport water molecules along with substrates; however, the molecular mechanism of water permeation is not well understood in plant transporters. Here, we show that plant sugar transporters from the SWEET (sugar will eventually be exported transporter) family act as water-conducting carrier proteins via a variety of passive and active mechanisms that allow the diffusion of water molecules from one side of the membrane to the other. This study provides a molecular perspective on how plant membrane transporters act as water carrier proteins, a topic that has not been extensively explored in the literature. Water permeation in membrane transporters could occur via four distinct mechanisms, which form our hypothesis for water transport in SWEETs. These hypotheses are tested using molecular dynamics simulations of the outward-facing, occluded, and inward-facing states of AtSWEET1 to identify the water permeation pathways and the flux associated with them. The hydrophobic gates at the center of the transport tunnel act as barriers that restrict water permeation. We have performed in silico single and double mutations of the hydrophobic gate residues to examine the changes in water conductivity. Surprisingly, the double mutant allows water permeation to the intracellular half of the membrane and forms a continuous water channel. These computational results are validated by experimentally examining the transport of hydrogen peroxide molecules by the AtSWEET family of transporters. We have also shown that the transport of hydrogen peroxide follows a mechanism similar to that of water transport in AtSWEET1. Finally, we conclude that similar water-conduction states are also present in other SWEETs due to the high degree of sequence and structural conservation exhibited by this transporter family.

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SWEET家族转运蛋白在植物中作为水传导载体蛋白。
在植物中,专门的水通道参与了水分子在细胞膜上的扩散。众所周知,转运蛋白也能与底物一起运输水分子;然而,植物转运体中水分渗透的分子机制尚不清楚。在这里,我们展示了来自SWEET(糖最终将被输出转运蛋白)家族的植物糖转运蛋白通过各种被动和主动机制充当水传导载体蛋白,允许水分子从膜的一侧扩散到另一侧。本研究从分子角度探讨了植物膜转运蛋白作为水载体蛋白的作用,这是一个尚未在文献中广泛探讨的话题。水在膜转运体中的渗透可以通过四种不同的机制发生,这形成了我们对糖的水运输的假设。通过对AtSWEET1向外、封闭和向内状态的分子动力学模拟来验证这些假设,以确定水渗透途径和与之相关的通量。运输隧道中心的疏水闸门起到了限制水渗透的屏障作用。我们在硅中进行了疏水栅残基的单突变和双突变,以检查水电导率的变化。令人惊讶的是,双突变体允许水渗透到膜的细胞内一半,并形成一个连续的水通道。这些计算结果通过AtSWEET转运体家族对过氧化氢分子的运输进行了实验验证。我们还表明,过氧化氢的运输遵循类似于AtSWEET1中水运输的机制。最后,我们得出结论,由于该转运蛋白家族表现出高度的序列和结构保守性,在其他sweet中也存在类似的水传导状态。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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