Second coordination sphere regulates nanozyme inhibition to assist early drug discovery

IF 15.7 1区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Nature Communications Pub Date : 2025-04-01 DOI:10.1038/s41467-025-58291-7
Yu Wu, Jian Li, Wenxuan Jiang, Weiqing Xu, Lirong Zheng, Canglong Wang, Wenling Gu, Chengzhou Zhu
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Abstract

Early drug discovery is a time- and cost-consuming task requiring enzymes. Although nanozymes with metal sites akin to metallocofactors display similar activities, the lack of proximal amino acids hinders them from more adequately mimicking enzymes for drug discovery purposes. Hence, the rational design of the nanozyme second coordination sphere is desirable yet remains challenging. Herein, we report a nanozyme featuring atomically dispersed Cu-N4 sites with proximal hydroxyl groups (CuNC-OH). Experimental and theoretical results reveal that Cu-N4 site and hydroxyl respectively behave as cofactor and amino acid of the enzymatic pocket to interact with adsorbates, regulating nanozyme activity and inhibition. This mechanism involving dual sites is similar to that of thyroid peroxidases, which enables specific inhibition of CuNC-OH by antithyroid drugs. Based on these findings, a nanozyme-assisted drug discovery kit is established to analyze inhibition features of thyroid peroxidase inhibitors and screen out promising antithyroid drugs with a significant cost reduction compared with traditional enzyme kits.

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第二配位球调节纳米酶抑制,以协助早期药物发现
早期药物发现是一项耗时耗钱的任务,需要酶。虽然纳米酶具有类似于金属辅助因子的金属位点,但缺乏近端氨基酸阻碍了它们更充分地模仿酶以用于药物发现目的。因此,纳米酶第二配位球的合理设计是人们所需要的,但仍然具有挑战性。在这里,我们报道了一种纳米酶,它具有原子分散的Cu-N4位点和近端羟基(CuNC-OH)。实验和理论结果表明,Cu-N4位点和羟基分别作为酶袋的辅助因子和氨基酸与吸附物相互作用,调节纳米酶的活性和抑制作用。这种涉及双位点的机制与甲状腺过氧化物酶类似,可以通过抗甲状腺药物特异性抑制CuNC-OH。基于这些发现,我们建立了一个纳米酶辅助药物发现试剂盒,分析甲状腺过氧化物酶抑制剂的抑制特性,筛选出有希望的抗甲状腺药物,与传统酶试剂盒相比,成本显著降低。
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文献相关原料
公司名称
产品信息
阿拉丁
thyroid peroxidase
阿拉丁
GSH
阿拉丁
cysteine
阿拉丁
TMB
阿拉丁
DMPO
来源期刊
Nature Communications
Nature Communications Biological Science Disciplines-
CiteScore
24.90
自引率
2.40%
发文量
6928
审稿时长
3.7 months
期刊介绍: Nature Communications, an open-access journal, publishes high-quality research spanning all areas of the natural sciences. Papers featured in the journal showcase significant advances relevant to specialists in each respective field. With a 2-year impact factor of 16.6 (2022) and a median time of 8 days from submission to the first editorial decision, Nature Communications is committed to rapid dissemination of research findings. As a multidisciplinary journal, it welcomes contributions from biological, health, physical, chemical, Earth, social, mathematical, applied, and engineering sciences, aiming to highlight important breakthroughs within each domain.
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