Advances in AAV capsid engineering: Integrating rational design, directed evolution and machine learning.

IF 12 1区 医学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Molecular Therapy Pub Date : 2025-05-07 Epub Date: 2025-04-01 DOI:10.1016/j.ymthe.2025.03.056
Alan M Nisanov, Julio A Rivera de Jesús, David V Schaffer
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Abstract

Adeno-associated virus (AAV) has emerged as a highly promising vector for human gene therapy due to its favorable safety profile, versatility, and ability to transduce a wide range of tissues. However, natural AAV serotypes have shortcomings, including suboptimal transduction efficiency, pre-existing immunity, and a lack of tissue specificity, that hinder their therapeutic potential. To address these challenges, significant efforts are being applied to engineer novel AAV capsids. Rational design leverages structural insights to enhance capsid properties, directed evolution enables unbiased selection of superior variants, and machine learning accelerates discovery by computational analysis of high-throughput screening results to enable predictive algorithms. These strategies have yielded novel capsids with improved transduction efficiency, reduced immunogenicity, and enhanced tissue targeting. Future advances that continue to integrate such multi-disciplinary approaches will further drive the clinical translation of AAV-based therapies.

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AAV 胶囊工程的进展:整合合理设计、定向进化和机器学习。
腺相关病毒由于其良好的安全性、多功能性和转导广泛组织的能力,已成为一种非常有前途的人类基因治疗载体。然而,天然AAV血清型有缺点,包括不理想的转导效率、预先存在的免疫和缺乏组织特异性,这些都阻碍了它们的治疗潜力。为了应对这些挑战,人们正在努力设计新型AAV衣壳。理性设计利用结构洞察力来增强衣壳特性,定向进化可以无偏地选择优越的变体,机器学习通过计算分析高通量筛选结果来加速发现,从而实现预测算法。这些策略已经产生了具有提高转导效率、降低免疫原性和增强组织靶向性的新型衣壳。未来的进展将继续整合这些多学科方法,进一步推动基于aav的治疗的临床转化。
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来源期刊
Molecular Therapy
Molecular Therapy 医学-生物工程与应用微生物
CiteScore
19.20
自引率
3.20%
发文量
357
审稿时长
3 months
期刊介绍: Molecular Therapy is the leading journal for research in gene transfer, vector development, stem cell manipulation, and therapeutic interventions. It covers a broad spectrum of topics including genetic and acquired disease correction, vaccine development, pre-clinical validation, safety/efficacy studies, and clinical trials. With a focus on advancing genetics, medicine, and biotechnology, Molecular Therapy publishes peer-reviewed research, reviews, and commentaries to showcase the latest advancements in the field. With an impressive impact factor of 12.4 in 2022, it continues to attract top-tier contributions.
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