Click Conjugates of Artificial Ribonucleases: Sequence Specific Cleavage with Multiple Turnover

IF 3.7 2区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Chemistry - A European Journal Pub Date : 2025-04-07 DOI:10.1002/chem.202500451
Sandra Weber, Timo Weinrich, Ute Scheffer, Elisabeth Kalden, Michael W. Göbel
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Abstract

The azido modified RNA cleaving catalyst 2 has been attached to oligonucleotides containing alkyne linkers in a central position. The resulting conjugates hybridize specifically with complementary RNA strands and cleave them with multiple substrate turnover. RNA half-lives are in the range of 6–7 hours (pH 8, 37 °C). Some well-placed locked nucleic acid (LNA) nucleotides can further increase substrate affinities and reaction rates significantly (t½ of 3.5 hours, kobs = 0.20 h−1). RNA cleavage does not require metal ions and runs equally well in the presence of EDTA. Fragments of precisely defined lengths are formed, well suited for subsequent analysis by mass spectrometry and related bioanalytical techniques.

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点击人工核糖核酸酶的共轭物:序列特异性切割与多次翻转。
叠氮修饰的 RNA 裂解催化剂 2 与寡核苷酸相连,寡核苷酸的中心位置含有炔链节。由此产生的共轭物能与互补的 RNA 链发生特异性杂交,并通过多次底物转换将其裂解。RNA 半衰期为 6-7 小时(pH 值为 8,温度为 37 °C)。一些位置合适的 LNA 核苷酸可进一步提高底物亲和力,并显著提高反应速度(t½ 为 3.5 小时,kobs = 0.20 小时-1)。RNA 的裂解不需要金属离子,在 EDTA 存在的情况下也能顺利进行。形成的片段长度精确,非常适合后续的质谱分析和相关生物分析技术。
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来源期刊
Chemistry - A European Journal
Chemistry - A European Journal 化学-化学综合
CiteScore
7.90
自引率
4.70%
发文量
1808
审稿时长
1.8 months
期刊介绍: Chemistry—A European Journal is a truly international journal with top quality contributions (2018 ISI Impact Factor: 5.16). It publishes a wide range of outstanding Reviews, Minireviews, Concepts, Full Papers, and Communications from all areas of chemistry and related fields. Based in Europe Chemistry—A European Journal provides an excellent platform for increasing the visibility of European chemistry as well as for featuring the best research from authors from around the world. All manuscripts are peer-reviewed, and electronic processing ensures accurate reproduction of text and data, plus short publication times. The Concepts section provides nonspecialist readers with a useful conceptual guide to unfamiliar areas and experts with new angles on familiar problems. Chemistry—A European Journal is published on behalf of ChemPubSoc Europe, a group of 16 national chemical societies from within Europe, and supported by the Asian Chemical Editorial Societies. The ChemPubSoc Europe family comprises: Angewandte Chemie, Chemistry—A European Journal, European Journal of Organic Chemistry, European Journal of Inorganic Chemistry, ChemPhysChem, ChemBioChem, ChemMedChem, ChemCatChem, ChemSusChem, ChemPlusChem, ChemElectroChem, and ChemistryOpen.
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