Strides in the technology of systems physiology and the art of testing complex hypotheses.

Federation proceedings Pub Date : 1987-06-01
J B Bassingthwaighte
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Abstract

Scientific understanding in physics or physiology is based on models or theories devised to describe what is known, within the limits imposed by observation error. Carefully integrated models can be used for prediction, and the inferences assessed via further experiments designed to test the adequacy of the theory summarizing the state of knowledge. This is the systems approach, the basis of theoretical physiology; the models, like those of theoretical physics, should be firmly based on fundamental reproducible observations of a physical or chemical nature, held together with the principles of mathematics, logic, and the conservation of mass and energy. Modern computing power is such that comprehensive models can now be constructed and tested. For this approach data sets should include as many simultaneously obtained items of information of differing sorts as possible to reduce the degrees of freedom in fitting models to data. By taking advantage of large memories and rapid computation, modular construction techniques permit the formulation of multimodels covering more than a single hierarchical level, and thereby allow the investigator to understand the effects of controllers at the molecular level on overall cell or organism behavior. How does this influence the research and teaching practices of physiology? Because the computer also allows a new type of collaboration involving the networking of ideas, data bases, analytical techniques, and experiment designing, investigators in geographically distributed individual laboratories can plan, work, and analyze in concert. The prediction from this socioscientific model is therefore that networked computer-based modeling will serve to coalesce the ideas and observations of enlarging groups of investigators.

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在系统生理学技术和测试复杂假设的艺术方面取得了长足的进步。
物理学或生理学的科学理解是建立在模型或理论的基础上的,这些模型或理论是为了在观测误差的限制下描述已知的东西。仔细整合的模型可以用于预测,并通过进一步的实验来评估推断,以测试总结知识状态的理论的充分性。这是系统方法,理论生理学的基础;这些模型,就像理论物理学的模型一样,应该牢固地建立在对物理或化学性质的基本可重复观察的基础上,并与数学、逻辑以及质量和能量守恒的原则结合在一起。现代计算能力使得现在可以构建和测试全面的模型。对于这种方法,数据集应该包括尽可能多的同时获得的不同种类的信息项,以减少模型拟合数据的自由度。通过利用大内存和快速计算的优势,模块化构建技术允许制定多模型,覆盖多个单一层次水平,从而允许研究者在分子水平上理解控制器对整个细胞或生物体行为的影响。这对生理学的研究和教学实践有何影响?由于计算机还允许一种新型的协作,包括思想、数据库、分析技术和实验设计的网络化,地理上分散的单个实验室的研究人员可以协同规划、工作和分析。因此,从这个社会科学模型中得出的预测是,基于网络的计算机建模将有助于整合不断扩大的研究人员群体的想法和观察结果。
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